Streptomyces violascens: HWN34_24645
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Entry
HWN34_24645 CDS
T08842
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
svio
Streptomyces violascens
Pathway
svio03030
DNA replication
svio03410
Base excision repair
svio03420
Nucleotide excision repair
svio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWN34_24645 (polA)
03410 Base excision repair
HWN34_24645 (polA)
03420 Nucleotide excision repair
HWN34_24645 (polA)
03440 Homologous recombination
HWN34_24645 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svio03032
]
HWN34_24645 (polA)
03400 DNA repair and recombination proteins [BR:
svio03400
]
HWN34_24645 (polA)
Enzymes [BR:
svio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWN34_24645 (polA)
DNA replication proteins [BR:
svio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HWN34_24645 (polA)
DNA repair and recombination proteins [BR:
svio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HWN34_24645 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWN34_24645 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QLA60839
LinkDB
All DBs
Position
5645646..5648303
Genome browser
AA seq
885 aa
AA seq
DB search
MLMDGHSLAYRAFFALPAENFTTVTGQPTNAIYGFASMLANTLRDEQPTHFAVAFDVSRK
TWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMHAPRFAVDGFEADDVIATLATQAEA
AGFEVLIVTGDRDSFQLISDHTTVLYPTKGVSELTRFTPEKVFEKYGLTPAQYPDFAALR
GDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERAEEVKGKAGQNFRDHLEAVKLNRRLT
EMIRDVELDRTVTDLERAPYDRKALTLVLDTLEIRNPSLRERLLAVDPGAAEEETATEPA
VEIDGAVLGAGELEPWLGEHGGSLLGMATVDTWKLGEGSVTEVALAAPGGAAAWFDPARL
DEADEKAFAQWLAAADRPKILHNAKGVMRVFAEHGWRVEGVTMDTALAAYLVKPGRRSFA
LDALSLEYLGRELAPATADGQLTLGADDEAEAHALMVQARTVLDLGAAFGERLEQVGATG
LLADVELPTSILLASLERAGIAADRDHLEAMERQFAAAVQQAVKEAHDAVGREFNLGSPK
QLQEVLFGELNLPKTKKTKTGYTTDADALAWLAAQTDHELPVIMLRHREQAKLRVTVEGL
IKSIATDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDEGRAIRRGFVVGEGYESLMTA
DYSQIELRVMAHLSQDEGLIEAFTSGEDLHTTVASQVFGVERDAVDAEMRRKIKAMSYGL
AYGLSAFGLSQQLNIDAGEARALMDTYFERFGGVRDYLRHAVDEARATGYTETMLGRRRY
LPDLNSDNRQRRETAERMALNAPIQGTAADIVKIAMLRVHRALTEARLSSRMLLQVHDEI
VLEIAPGERERVEEIVRREMADAVQLRAPLDVSVGVGQNWEAAAH
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggacgggcactccctggcgtaccgggcgttcttcgcgctgcccgcggagaac
ttcacgaccgtgaccggccagccgaccaacgcgatctacggcttcgcgtccatgctggcg
aacaccctgcgtgacgagcagccgacgcatttcgccgtcgccttcgacgtctcccgcaag
acgtggcggtccgaggagttcacggagtacaaggcgaaccgctccaagacccccgacgag
ttcaagggccaggtcgagctgatcggcgagctgctcgacgcgatgcacgcgccgcgcttc
gcggtcgacggcttcgaggccgacgacgtcatcgccaccctcgccacccaggcggaggcg
gcgggcttcgaggtcctcatcgtcaccggcgaccgcgactccttccagctgatcagcgac
cacaccacggtgctctacccgaccaagggcgtctccgagctgacccgcttcaccccggag
aaggtcttcgagaagtacgggctgacccccgcccagtacccggacttcgccgccctgcgc
ggcgacccctccgacaacctcccgggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggttccttcgccgagctggtggagcgcgccgaggaggtcaagggc
aaggccgggcagaacttccgcgaccacctggaggcggtgaagctcaaccgccgcctcacc
gagatgatccgcgacgtcgagctggaccgcaccgtcaccgacctggagcgcgccccttac
gaccgcaaggcgctcaccctggtcctggacaccctggagatccgcaacccctcgctgcgc
gagcggctgctcgccgtcgacccgggggcggccgaggaggagaccgccaccgagccggcc
gtcgagatcgacggcgcggtcctcggcgcgggcgagctggagccctggctcggcgagcac
ggcggttcgctcctcggcatggccaccgtcgacacctggaagctcggcgagggctcggtc
accgaggtcgcgctggccgcgcccggcggggccgccgcctggttcgacccggcgcggctg
gacgaggccgacgagaaggcgttcgcccagtggctggccgccgccgaccgcccgaagatc
ctgcacaacgccaagggcgtcatgcgggtcttcgccgagcacggctggcgcgtcgagggc
gtcacgatggacaccgccctcgccgcctacctggtcaagccgggccgccgctccttcgcg
ctggacgccctctccctggagtacctgggccgtgagctggccccggccaccgccgacggg
cagctcaccctcggcgccgacgacgaggcggaggcgcacgccctgatggtgcaggcccgc
accgtcctcgacctcggcgcggccttcggcgagcggctggagcaggtcggcgcgacgggg
ctgctggccgacgtggagctgcccacctcgatcctgctggccagcctggagcgggccggc
atcgccgccgaccgggaccatctggaggcgatggagcggcagttcgccgccgccgtccag
caggcggtgaaggaggcgcacgacgcggtcggccgcgagttcaacctcggctcgcccaag
cagctccaggaggtcctcttcggcgagctgaacctcccgaagaccaagaagaccaagacc
ggttacaccaccgacgccgacgctctcgcctggctcgccgcgcagaccgaccacgagctg
ccggtgatcatgctgcgccaccgcgagcaggccaagctccgcgtcaccgtcgagggcctg
atcaagtcgatcgccaccgacggccgcatccacaccaccttcaaccagaccgtcgccgcc
accggccggctctcctccaccgagccgaacctgcagaacatccccgtccgcaccgacgag
ggccgcgccatccgccgcggcttcgtggtcggcgaggggtacgagtcgctgatgacggcc
gactacagccagatcgagctgcgcgtcatggcccacctctcccaggacgaggggctcatc
gaggcgttcacctccggcgaggacctgcacaccacggtcgcctcccaggtcttcggcgtc
gagcgggacgccgtcgacgccgagatgcgccgcaagatcaaggccatgtcgtacggcctg
gcgtacgggctctccgccttcggcctctcccagcagctgaacatcgacgcgggcgaggca
cgcgcgctgatggacacctacttcgagcggttcggcggcgtccgcgactacctgcggcac
gccgtggacgaggcccgcgccacgggctacaccgagacgatgctcggccgccgccgctac
ctcccggacctcaacagcgacaaccgccagcgccgcgagaccgccgagcggatggcgctc
aacgcccccatccagggcaccgccgccgacatcgtcaagatcgccatgctgcgggtccac
cgcgccctgaccgaggcccggctcagcagccggatgctcctccaggtgcacgacgaaatc
gtgctggagatcgccccgggcgagcgggagcgggtcgaggagatcgtccgccgcgagatg
gcggacgcggtgcagctccgcgccccgctggacgtctcggtcggcgtcggccagaactgg
gaggcggccgcgcactga
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