Streptomyces violascens: HWN34_26250
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Entry
HWN34_26250 CDS
T08842
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svio03019
]
HWN34_26250
Enzymes [BR:
svio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HWN34_26250
Messenger RNA biogenesis [BR:
svio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HWN34_26250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLA59808
LinkDB
All DBs
Position
5993066..5995873
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AA seq
935 aa
AA seq
DB search
MTEDLSPAERYAAARRRAVEEATALASFREMYDFGLDPFQLDACRSLEEGKGVLVAAPTG
SGKTIVGEFAVHLALGQSKKCFYTTPIKALSNQKYADLAKRYGADKVGLLTGDNSVNPDA
PVVVMTTEVLRNMLYAGSQTLTGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPPSVTLVSL
SATVSNAEEFGDWLDTVRGDTDVIVSEHRPVPLFQHVLAGRRMYDLFEEGEGAKKAVNPD
LLRMARLESSRPTGPKDRRRGRNMREADRERERRQRSRTWTPSRPEVIERLDAENLLPAI
TFIFSRAGCEAAVQQCLYAGLRLNDDAARSAVREIVEERTAAIPDEDLHVLGYFEWLEGL
ERGIAAHHAGMLPTFKEVVEELFLRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQ
HADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMNPEHLAGLAGTRTYPLRSSFKPSYN
MAVNLVHQFGRHRSRELLETSFAQFQADRSVVGISRQVQRNEEGLEGYAASMTCHLGDFE
EYGRLRRELKDRETELARQGAGQRRAEAAGALEKLRPGDIIHVPTGKYAGLALVLDPGLP
AGRSNGHRGFDHHDGPRPLVLTAERQVKRLAAMDFPVPVEALDRMRVPKSFNARSPQSRR
DLASALRTRAGHLEPKRHRKGRSAAADDREIARLRTAIRAHPCHGCDEREDHARWAERYH
RLKRDTRQLERRIEGRTNTIARTFDRIVNLLTELGYLRGNEVTEDGRRLSRLYGELDLLA
SECLREGVWEGLGPAELAACVSALVFEARQADDAVVPKLPSGAAKSALGEMVRIWGRLDA
LEEQHGISQTEGVGQREPDLGFAWAAYMWASGKGLDAVLREAEMPAGDFVRWCKQVIDVL
GQIAAAAPEGSTVARSARKAVDAVRRGVVAYSSVG
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacctctccccggccgagcggtacgcggcggcgcggcggcgcgccgtcgag
gaggcgaccgcgctcgcctccttccgcgagatgtacgacttcggcctcgaccctttccag
ctcgacgcctgccgctccctggaggagggcaagggcgtcctggtggccgcgcccaccggt
tccggcaagacgatcgtcggcgagttcgccgtccacctggcactcggccagtccaagaag
tgcttctacaccaccccgatcaaggcgctctccaaccagaagtacgccgacctcgccaag
cggtacggcgcggacaaggtcggcctgctcaccggtgacaacagcgtcaacccggacgcc
cccgtcgtggtcatgaccaccgaggtcctgcggaacatgctgtacgcgggctcccagacc
ctcacgggcctcgggtacgtggtcatggacgaggtgcactacctctccgaccggttccgg
ggcgccgtctgggaagaggtgatcatccacctgcccccgtcggtgacgctcgtctcgctc
tcggccaccgtctccaacgccgaggagttcggcgactggctcgacaccgtccgcggtgac
accgacgtcatcgtctccgagcaccgcccggtcccgctcttccagcacgtcctggccgga
cgccggatgtacgacctcttcgaggagggcgagggagccaagaaggcggtcaacccggac
ctgctgcggatggcccggctggagtccagccgccccaccggcccgaaggaccgccgccgc
ggccggaacatgcgcgaggccgaccgggaacgcgagcgccggcagcgctcgcgcacctgg
acgccgagcaggcccgaggtgatcgagcggctcgacgcggagaacctcctgcccgccatc
accttcatcttcagccgggccggctgcgaggccgccgtccagcagtgcctctacgccggg
ctgcggctcaacgacgacgcggcccgctccgccgtccgcgagatcgtcgaggagcgcacc
gccgccatccccgacgaggacctgcacgtcctcggctacttcgagtggctggaagggctg
gagcgcggcatcgccgcccaccacgcggggatgctccccaccttcaaggaggtggtcgag
gagctgttcctgcgcggactggtcaaggccgtcttcgccaccgagacgctcgcgctgggc
atcaacatgccggcccgctcggtcgtcctggagaagctcgtcaagtggaacggcgagcag
cacgccgacatcacccccggcgagtacacccagctcaccggccgtgccgggcgccgcggc
atcgacgtcgagggccacgccgtggtcctgtggcagcgcgccatgaacccggagcacctg
gccggcctggccgggacgcgcacgtatccgctccgctccagcttcaagccgtcgtacaac
atggcggtcaacctggtgcaccagttcgggcggcaccgctcgcgcgagctgctggagacc
tccttcgcccagttccaggccgaccgctcggtggtcggcatctcccgccaggtccagcgg
aacgaagagggcctggaggggtacgcggcctcgatgacctgccacctcggtgacttcgag
gagtacggcaggctgcgccgggagctgaaggaccgcgagacggagctggcccggcagggc
gccggccagcgccgcgcggaggccgccggggcgctggagaagctccggcccggcgacatc
atccacgtccccaccggcaagtacgcggggctcgccctggtcctcgacccggggctgccc
gccggccgcagcaacggccaccgcggcttcgaccatcacgacgggccccgcccgctggtg
ctcaccgccgagcggcaggtcaagcggctggccgcgatggacttcccggtcccggtggaa
gccctggaccggatgcgcgtgcccaagtcgttcaacgccaggtcgccgcagtcccgccgc
gacctggcctcggcgctgcgcacccgcgccgggcacctggagcccaagcggcaccgcaag
gggcgctcggccgccgccgacgaccgcgagatcgcccggctgcgcaccgccatccgcgcc
cacccctgccacggctgcgacgagcgcgaggaccacgcacggtgggccgagcgctaccac
cggctgaagcgggacacccggcagctggagcgccggatcgagggccgcaccaacaccatc
gcccgcaccttcgaccgcatcgtcaacctcctcaccgaactcggctacctccggggcaac
gaggtcaccgaggacgggcggcggctgagccggctctacggcgagctggacctgctcgcc
tccgagtgcctgcgtgagggcgtctgggaggggctcggcccggccgagctggccgcctgt
gtctccgccctggtcttcgaggcccggcaggcggacgacgcggtggtgccgaagctgccc
tccggcgcggccaagtcggcgctcggcgagatggtgcgcatctggggccggctcgacgcc
ctggaggagcagcacggcatcagccagaccgagggcgtcggccagcgcgagccggacctc
ggcttcgcctgggccgcctacatgtgggcctccggcaaggggctggacgcggtgctgcgg
gaggcggagatgccggccggtgacttcgtccgctggtgcaagcaggtcatcgacgtgctc
ggccagatcgcggccgccgcccccgagggctcgaccgtggcgcgcagcgcccgcaaggcc
gtcgacgcggtgcgccggggcgtcgtcgcgtactcctcggtgggctga
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