Sander vitreus (walleye): 144512670
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Entry
144512670 CDS
T11640
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
svit Sander vitreus (walleye)
Pathway
svit04080
Neuroactive ligand-receptor interaction
svit04082
Neuroactive ligand signaling
svit04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
144512670
04082 Neuroactive ligand signaling
144512670
04519 Cadherin signaling
144512670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svit04040
]
144512670
Ion channels [BR:
svit04040
]
Ligand-gated channels
GABA-A
144512670
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
144512670
NCBI-ProteinID:
XP_078099637
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All DBs
Position
24:complement(4904752..4928810)
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AA seq
475 aa
AA seq
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MVVMDLHSGLNNRQVSRVSVMTRFVLSLLLLCGCQNSLCLSSSEAPKEAAANDNSTVFTR
ILDGLLDGYDNRLRPGLGENVTEIQTNIFVTSFGPVSDTEMEYTIDVFFRQTWKDERLCF
KGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISA
ECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTEGASKPVMVAEDGSRLNQYLLIGLT
SSTENIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTV
FGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAW
DGKKALEAQPPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRASETK
MVDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNRVPLVEGVVEGVVTST
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggatctgcattcaggtctaaacaatagacaagtaagcagagtttcagtc
atgacgaggttcgtcctttccctgctgctcctatgtggatgccaaaatagtctctgcctg
tcctcctcagaggctccaaaggaggcggccgccaacgacaacagcacagtgttcaccagg
atcctggacgggctccttgacggttatgacaacaggctccggccggggctcggagaaaat
gtcacagagatccagacgaatatttttgtcaccagctttggcccggtgtctgacacagag
atggaatataccatagacgtcttcttccgtcagacctggaaggacgagcgtctgtgcttc
aaagggcccatggagatgctgccgttgaacaacctgctggccagcaacatctggaccccc
gataccttcttccttaatggcaagaagtctattgctcataacatgaccacgcctaacaag
ctgctgaggctgaaggatgacggcactttgctttacactatgagactgaccatatcagca
gaatgccccatgcagctggaggatttccccatggatgcacacgcctgccctctcaagttt
ggcagctatgcctatccggtgtcagaggtggtctacacttggactgagggagcttctaag
cctgtgatggtggcagaagacggctccagactcaaccagtaccttcttatcgggttaacc
tccagcacagagaacatacacacaagcagaggacagtatacagtgatgatggcccacttc
tacttgaagaggaagattggatattttgtcatccagacgtatatgccgtgtttcatgact
gtaatcctgtcccaggtgtcattttggctaaacagagaatcagttcctgcaaggactgtc
tttggggtgaccactgtgctgaccatgaccaccctcagcatcagtgcaaggaactcactc
cctaaagtggcctacgctacagctatggattggttcattgccgtctgctacgctttcgtc
ttttctgccctcatcgagtttgccacggtgaactacttcaccaagaggagctgggcctgg
gatggcaagaaggctctggaagcacagccccctaagaaacgagaccccatggtgctgtcc
aaaaagcctaacaacgtttgctcggcgggcgtcaactacacccccaacctcaccaaggac
gtgtccatctccacaatctccaacacaacgtcggtgcagctccgagcctctgagacaaag
atggtggaccccaagaaaacctacaacagcgtcagcaagatcgacaagatgtctcggata
gtgtttcctgtcctctttggaaccttcaacctcgtctactgggccacgtaccttaacaga
gtaccgctggtggaaggagtggtggaaggagtggtgacgtcaacgtaa
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