Sander vitreus (walleye): 144515846
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Entry
144515846 CDS
T11640
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
svit Sander vitreus (walleye)
Pathway
svit03022
Basal transcription factors
svit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
144515846 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
144515846 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svit03021
]
144515846 (ercc2)
03036 Chromosome and associated proteins [BR:
svit03036
]
144515846 (ercc2)
03400 DNA repair and recombination proteins [BR:
svit03400
]
144515846 (ercc2)
Enzymes [BR:
svit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
144515846 (ercc2)
Transcription machinery [BR:
svit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
144515846 (ercc2)
Chromosome and associated proteins [BR:
svit03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
144515846 (ercc2)
DNA repair and recombination proteins [BR:
svit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
144515846 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
144515846
NCBI-ProteinID:
XP_078103128
LinkDB
All DBs
Position
3:complement(31863820..31878594)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
KAFPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYSKQTGESNNFLALALSSRKNLCIHPE
VSALRFGKEVDGKCHSLTASYIRAQRHSDPDMPVCRFYEEFDAVGRQVPLPAGIYNLDDL
KDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCHTNVDTLQNTIQKIKETDAAKLKMEYRRLVEGLKEANVARE
TDVYLANPVLPDEILKEAVPGNIRTAEHFVGFLKRFLEYLKSRLRVQHVVQESAPQFLKD
IFDKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYVYMENIVASWYEQGILENIQRNKLIFIETPDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHINDGSLNLTVDEAVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLESEEMLQKIAKIAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgagggtctgctggtgtatttcccatatgactacatctatcctgag
cagtactcctatatgctggagctgaagaggactctggatgccaagggtcatggagtcctg
gagatgccttcaggaacagggaagaccatctctctgctgtctctcatcgttgcctaccaa
aaggcctttcctttggaagtgaccaagctaatatactgctccagaacagttcccgagatc
gagaaggtcgtggaggagctgaggaagttgatggagttttattccaagcaaactggagag
agcaacaacttcctggctctggctctttcctccagaaaaaacctctgcatccacccagag
gtgagcgctctgcgcttcggtaaggaggttgatgggaagtgccacagtctgacggcatcg
tacattcgcgcacaacgccacagcgaccccgacatgcctgtgtgtcgcttctatgaggag
tttgatgcagtcggacgacaggtgcctcttcctgctggcatctacaacctcgacgacctg
aaggacttcggcaggaggaaaggctggtgtccttattatctggcacgctactctatccta
catgcaaacattgttgtgtacagctaccactacctgctggaccccaagatagctgacctg
gtgtccaaagagctggccaagaagtctgtagtggtgtttgatgaggctcataatatagac
aatgtgtgcatcgactccatgagcgtgaacatcaccaggcgaacacttgaccgctgccat
accaatgtggacactcttcagaacaccatacaaaagataaaggagacggacgccgctaaa
ctgaagatggagtacaggcgattggtggagggactgaaggaagctaatgttgccagggaa
acagacgtctaccttgcaaatccagtgttaccagatgaaattctgaaagaggcggtgcct
ggcaatattcgcacagcagagcactttgttggtttcttgaaacgtttcctggagtatctg
aagtcccgtctgagggtccaacatgttgtacaggagagcgccccgcagttcctcaaagac
atcttcgacaaagtctgcatcgaccgcaagcctctcaggttttgtgcagagcggttacag
tcgcttctacgaactctggagattgctgacatcgcagacttctcagctgttactctcatc
tctaactttgctaccctggtcagcacctacagccaaggtttcacaataatcattgagccc
tttgaagacagaactccaaccattgccaaccctgtgctgcacttcagctgtatggacccg
tctattgccatcaaacctgtttttcaaagatttcagtcggtcatcatcacctctgggact
ctctcgccgctggacatctatccccgaatcctcgacttccgccctgttaccatggcatcc
ttcaccatgacgctggcacggacctgcctctgtcctctgattgttggcaggggaaatgat
caggtggccctgagctcaaagtttgagaccagagaagactttgctgtgattcgtaattat
ggcaacctacttctagagatgtctgcgatcgttcccgatggcattgtggcattcttcacc
agctacgtctacatggagaatatagtggcgtcttggtatgaacagggtatcctggagaat
atccagagaaacaagctgatcttcattgagactccggatgctgcagagacgagcatggcc
ctggagaaataccaggaggcatgtgagaacggcagaggagcaatcctcctgtctgtggcc
aggggaaaggtgtctgaaggaatagattttgtgcatcattttgggcgggccgtcatcatg
tttggagtgccttatgtttacacgcagagccgcatcctaaaggctcgtctggagtacctt
cgggatcagtttcagatcagagagaatgactttctgacgtttgatgccatgcgtcacgca
gcccagtgtgtgggcagagccatcagaggaaagaccgactacggactcatgatcttcgct
gacaagcgttatgcccgagcagacaaacgtgggaagcttcctcgctggatacaggaacac
atcaatgacggcagtctgaacctcaccgtggacgaggccgtccagctgtccaagcacttc
ctgcggcagatggctcagcctttcagacaggaggaccagttgggtctgtctctgttgact
ctggagcagctggagtcagaggagatgttgcagaaaatcgctaagatcgctcatcagacc
tga
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