KEGG   Sander vitreus (walleye): 144516372
Entry
144516372         CDS       T11640                                 
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
svit  Sander vitreus (walleye)
Pathway
svit04010  MAPK signaling pathway
svit04020  Calcium signaling pathway
svit04260  Cardiac muscle contraction
svit04261  Adrenergic signaling in cardiomyocytes
svit04270  Vascular smooth muscle contraction
svit04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:svit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    144516372
   04020 Calcium signaling pathway
    144516372
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    144516372
  09153 Circulatory system
   04260 Cardiac muscle contraction
    144516372
   04261 Adrenergic signaling in cardiomyocytes
    144516372
   04270 Vascular smooth muscle contraction
    144516372
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:svit04040]
    144516372
Ion channels [BR:svit04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   144516372
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 144516372
NCBI-ProteinID: XP_078103724
LinkDB
Position
4:2127388..2161292
AA seq 1678 aa
MTDSSSPPLSSYIMDEETLKRKQKEKLKKLMATGGNPRPARSLLFLTLRNPFRRACISIV
EWKPFEIIILVAIFANCVALAVYLPMPEEDSNNTNSNLESLEYIFLIIFSIECFLKIVAY
GFLFHADAYLRNCWNILDFVCVSVGLFSVVVDAINHISGVEAPVGEKGGGFDMKALRAFR
VLRPLRLVSGVPSLQVVMNSILKSMLPLFHITLLVLFMVTIYSIMGLELFKCKMHKTCYY
TGTNIIATVENEKPAPCAQAGNGRRCTINGTECRAGWPGPNQGITHFDNLGFSMLTVYQC
ITTQGWTDILYWVNDAIGMEWPWIFFTTLILVGSFFVLNLVLGVLSGEFTKEREKAKSRG
EFQKLRETQQLDEDLKGYMEWITQAEVMDNDQEGQGLLITENGGSETGSVGKMDTMQLIV
YYYKLARKWNRWLRRKCRFYVKSKLFYWWVIMLVFLNTLAIATEHHKQSQSLTNWQDTAN
KLLLSMFALEMFMKMYALGLPSYFISLFNRFDCFVVSTGIMELILVHMGIMSIMGISVLR
CIRLLRLLKVTRYWTSLSNLVASLLNSVRSIACLLLLLFLFIVIFSLLGMQVFGGKFNFP
NQPKPRSTFDSFPQALITVFQILTGEDWNAVMYDGIMAHGGPSMPGILVSIYFIILFVCG
NFILLNVFLAIAVDNLAEAESLTLAQKEKAEEKKRKKALRANMPDKASEEKANLAKKLAE
QRAKGVEGIPTTAKLKIDEFESNVNEIKDPFPPADFPGDDEEEDPNIPESPRPRPMADLQ
LKEEAVPMPEASSFFIFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPM
SFRNQVLAYADIVFTSVFTAEIVLKMTTYGAILHKGSFCRNSFNILDLLVVSVSLLSMGM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAVKTIGNIVLVTMLLDFMFACI
GVQLFKGQFYACTDPDKMTEESCKGWYIKYQEGALHEMEVRKREWTNSELNFDNIFNGML
ALFTISTFEGWPKLLYKAIDSNLEDKGPVYNNRVAISIFFIIYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSDHVTHLSDMLNVIFTVLFTVEMILKLMAFKAKGYFGDPWNVF
DFVIVIGSVVDVMLSEIDAALASSGGLYCLHGCTAVDPMQAIASSENMSVSVTFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALVDGTYV
NRNNNFQTFLQAVLLLFRCATGEAWHEVMLACMYGKKCDPKSDYLPGEEYTCGSNFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPQHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIPPPLGFGKFCPHRIACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEQANEELRGIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGFRPTKKSATHEIQAGLRNIEEEGVPELHRAISGDLVTEEEMDQAIDEAGEGIYRR
QGSLFGNHSDPFSVESEIADATQAASQRPLQMAEGVNNNITNSHASHRNQANKLRDES
NT seq 5037 nt   +upstreamnt  +downstreamnt
atgacagacagcagcagtccaccattgtcgtcctacatcatggatgaggaaactctgaag
agaaaacaaaaggagaagctaaagaagctgatggccacaggaggcaacccaaggcctgca
cgctctctcctcttcttgacattgaggaatcccttccgcagggcatgcatcagtatcgtg
gagtggaaaccttttgaaatcataatcctcgtggccatttttgccaactgtgtggccctg
gctgtgtacttgcccatgcctgaggaagacagcaacaacaccaacagcaacttggaaagc
ctggagtacatcttcctcatcatcttctcgatagagtgtttcctgaagattgttgcctat
ggatttctttttcatgcagatgcatacttaagaaactgctggaacattttggattttgtt
tgtgtatccgttggtttgttcagtgtggttgtggatgccattaaccatatcagtggagtg
gaggctccagtaggagaaaaaggtggaggatttgacatgaaagctctgcgggcattcaga
gttctccggccacttagactggtctctggagtcccaagccttcaagtggtgatgaactcc
atcttgaagtccatgctgcctctttttcacattaccctactggtccttttcatggtcacc
atttactccattatgggattggagctcttcaagtgcaaaatgcacaagacctgctactac
acaggcacaaatatcattgctacagtggagaatgagaagccagctccatgtgcccaagca
ggaaatggtcggcggtgtaccatcaatggcacagagtgtcgagctgggtggccaggccca
aatcaaggaatcacccactttgacaacctaggcttttctatgctgactgtctaccagtgt
atcaccacacaaggttggaccgacatcctctactgggtaaatgatgcaataggaatggaa
tggccatggatctttttcaccacactcatccttgttggctccttcttcgtgcttaacctg
gttctgggtgtgctcagtggtgagttcacaaaagagcgagaaaaggccaagtcccgtgga
gagtttcagaaactgagggaaacccagcagctagatgaggacctcaagggctatatggag
tggatcactcaggctgaggtcatggacaatgaccaggagggacagggcctgcttatcaca
gaaaatggaggatcagagaccggaagtgttggcaaaatggacacaatgcagctgatcgtt
tattactataagctggctcgtaagtggaatcgttggttacgtcgtaaatgcagattttat
gtaaagtccaaactgttctactggtgggtgatcatgctcgtcttcctcaatacgctggcc
atcgcaaccgaacaccacaaacagtctcagagtctcaccaactggcaagacactgccaat
aagcttctgctgtctatgtttgccctggagatgttcatgaagatgtatgctctaggctta
ccttcttacttcatctcactattcaatcgctttgactgcttcgtggtgtccactggcatt
atggagctcatccttgtccacatgggcatcatgtcaatcatgggcatttctgtgctgcgc
tgcatacgcctgcttcgcctgctcaaagtcaccagatactggacatctctcagtaatctg
gtggcttccctcttgaactcggtccgttccattgcctgcttgctgctgctcctcttcctt
ttcattgtcatcttctccctgctgggtatgcaggtgtttggagggaagttcaactttcct
aaccaacccaaaccccgcagcacctttgacagcttccctcaggccctcatcactgtgttc
cagatcctgacaggtgaggactggaatgctgtcatgtacgatggcatcatggctcatgga
ggacccagcatgccgggtattctagtcagcatctacttcatcatcctctttgtgtgtgga
aatttcatccttctaaatgtcttcctggccattgccgttgataatttggcagaggctgag
tctttgactttggcacagaaagaaaaagcagaggagaaaaaacgcaagaaagcactcagg
gccaacatgcctgacaaggcatcagaggagaaagccaatctggcaaagaagttggctgag
caaagggccaagggtgtagagggcatccctacaactgccaagctcaaaatcgacgagttt
gagtctaatgtcaatgagatcaaagacccattccctccagcagactttcctggtgatgat
gaggaggaggaccctaatatcccagaaagccctagacctcgtccaatggcagatctgcag
ttgaaggaggaagcagtgccgatgccagaagccagctcgttcttcatctttggacctcaa
aacaagttccggaagctctgccatcgtattatcaatgcgactactttcaccaacatcatc
ctcctcttcatccttctgtcatcaatttctttagctgctgaggatcccatcgatcccatg
tccttcaggaaccaggtgttggcctatgctgatatagtcttcacttcggtgttcacagca
gaaattgtgctcaagatgacaacatatggtgccattcttcacaaagggtctttctgtcgg
aactctttcaatatcttggatcttctggtggtcagtgtatctctcctctcaatgggcatg
gaatccagtgccatctcggtggtgaagattctcagggtgttaagggtactccgtccccta
agggccatcaacagagccaagggactcaagcatgtcgtccagtgtgtgtttgttgctgta
aagaccattggaaatattgtgctggtcaccatgctactggacttcatgtttgcctgcatt
ggagtccaacttttcaaaggccagttctatgcctgcacagatcctgacaaaatgactgag
gaatcatgcaaaggctggtatataaagtaccaggagggagcacttcatgaaatggaggtc
cgtaagagggaatggaccaactcagaactaaactttgacaacatcttcaatggcatgttg
gctctcttcaccatttctacctttgaaggatggccaaagttactatataaagccattgat
tcaaacttagaggataagggcccagtgtacaacaaccgagtggccatctcaatcttcttt
atcatctacctcatccttatcgccttcttcatgatgaatatttttgtgggcttcgtcatc
gtcaccttccaggagcaaggagagcaggagtataagaactgtgagctggacaaaaaccag
cgccagtgtgtgcagtatgctcttaaggcccgaccactgcgatgttatattcccaagaac
ccctaccagtatcaggtgtggtacatcgtcacctcctgctactttgagtacctcatgttc
ctccttattatgctcaacaccatgtgtcttggaatgcagcactgtaatcagtcggatcac
gtcactcacctgtctgacatgctgaacgtgattttcactgtgctcttcactgtggagatg
atccttaaactcatggccttcaaagcaaagggttattttggagacccatggaacgtcttt
gactttgtcatcgtcattggaagtgtcgtggacgtgatgttgagtgaaattgatgcagca
ctggcctcctctggaggactttactgtctccacggctgcactgcagtggatcccatgcaa
gcaattgcgtcttctgagaacatgagcgtatcagtcacattcttcagactgtttcgtgtc
atgcgtctagtgaaacttttgaatcgctctgaggggatacggaatcttctgtggaccttc
atcaaatcccttcaggctcttccatatgtggccctgctcatcctcatgctgttctttata
tacgctgtggttggaatgcagatatttggtaaaattgcattggtcgatggcacatacgtc
aacagaaacaacaacttccagacattcctacaggctgtgctgctgttattcagatgtgct
acaggagaggcatggcatgaagtgatgttagcgtgtatgtacgggaagaaatgtgatccc
aagtcggactacttacctggggaagagtacacctgtggatccaactttgccatcatctac
ttcatgagtttctacatgctctgtgcctttctgatcatcaacctatttgtggctgtcatc
atggataactttgactacttgacacgagattggtctatccttgggccacagcacttggat
gagttcaagaaaatatgggcagagtatgatcctgaggctacgggtcgtattaagcacctt
gatgtggtgacactcctacgaagaatacctcctcctctgggttttggcaagttttgtcct
catcgtatcgcctgcaagaggttggtctccatgaacatgcctctcaacagtgatggaaca
gtcaccttcaacgccacactgtttgccctggttagaactgcactgaaaataaagaccgaa
ggtaattttgaacaagccaacgaggagctgaggggaattatcaagaagatctggaagcgc
accagtatgaaacttctggatcaagtcatcccacctataggagatgatgaggtgacagtg
ggaaagttctatgccactttcctaattcaggattatttcaggaaattgaagaagagacag
gaagagtactatggcttccggcccaccaagaaaagtgccacccatgagatacaggcaggg
ttgaggaacattgaggaggagggcgttccagagctccacagggccatctccggagacctt
gtgacggaagaagagatggaccaagctattgacgaagctggggagggcatctacaggaga
caaggtagtcttttcggaaaccactctgaccctttttctgtggagagtgagatagccgat
gctacccaggccgctagccagcgtccactgcagatggcagaaggagtcaacaacaatatc
accaacagccacgcaagtcacaggaaccaagccaacaagctacgagatgaatcgtga

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