Sander vitreus (walleye): 144516938
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Entry
144516938 CDS
T11640
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
svit Sander vitreus (walleye)
Pathway
svit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
144516938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svit02000
]
144516938
Transporters [BR:
svit02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
144516938
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
144516938
NCBI-ProteinID:
XP_078104783
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Position
4:complement(15762674..15787015)
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AA seq
582 aa
AA seq
DB search
MDKPYGPEVKFKLDMDTAHPAPSTLARGEWSSKIEFLLAVAGQIIGLGNVWRFPYLCYKN
GGGVFFIPYVLFLFTCGIPLFLLETSLGQYTKQGSITCWRKICPLFEGMGYGSQVVVLYS
SIYYIIILAWAFLYLFCSFNTELPWASCRNSWNTETCVEFDRRPADLNWTVAENATSPVR
EFWERRVLNVTGSIHELGGIRWELALCLLLSWIICYFCVWKGVKSTGKVVYFTATFPYLM
LAVLLVRGLTLPGAIDGIKFYLYPDPSRLTDPQVWMDAGTQIFYSYAICIGCLTALGSYN
KYNNNCYKDCVYLCLLNSGTSFVAGFAIFSALGFMAYEQNTDISKVAESGPGLAFIAYPR
AVAMMPFPQVWAIFFFIMIILLGLDSEFVGLEAMVTAIADTNPSFFHVGHRRKLLLLAIS
VVSFFIGLMMVTEGGLYIFQLFDYYACSGMTLLLFATLQSGCIGWIYGADRFYDNIEDMI
GYKPLSLIKYCLKYVTPVICMGTFVFSLIKYTPLKFNNTIEYPWWGYALGWWFTLSSTLM
VPLFMMYKVSTTPGTLQQVSCFSLCVCVCVCVCVCVSWKHLL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacaagccttatggtccagaggtcaagttcaagctggatatggacacagcccatcct
gcacccagcaccttggccagaggagagtggtcaagcaaaattgagttcctcttggctgtt
gctggacaaatcataggcttaggaaatgtgtggaggtttccctacctgtgctacaaaaat
ggaggaggggtgttcttcatcccttatgtcctcttcctctttacctgcggcatccccctg
tttctcctggagacatctctcggccagtacacgaaacagggaagtattacctgctggagg
aaaatttgtccactttttgaagggatgggttatggcagtcaggtggttgttttatactcc
agcatctattacataatcatattggcctgggctttcctgtatctcttctgctctttcaac
actgaacttccctgggcgagttgcagaaacagctggaacacagagacctgtgttgagttt
gatcgaaggcctgctgatttgaactggactgtagctgaaaatgcaacatcaccagtgaga
gagttttgggagagaagagttttgaatgtcacaggaagtatccatgagttaggcggcata
cgatgggagctggctctgtgtcttctgttgtcctggatcatctgttacttttgtgtctgg
aaaggagtaaagtccactgggaaggtagtttactttactgccacatttccatacctgatg
ctggcagtgttgcttgttcgtggactcacattgccgggggccatagacgggattaagttc
tacctctacccagatccatcccgcctgactgatccacaggtgtggatggatgctggcaca
caaatattttattcctatgctatttgcattgggtgtttaactgcacttggcagttataac
aagtacaacaacaactgttacaaggactgtgtatatttgtgccttctgaacagtgggacc
agttttgtagctggctttgccattttctctgcacttggatttatggcatatgaacagaac
acagacatatcaaaagtggcagagtcgggtcctggcttggcgtttattgcctatcctcga
gcagttgccatgatgccttttcctcaggtctgggcgatattctttttcattatgatcatc
ctactgggactggacagtgagtttgtaggtctggaagccatggtaacagcgattgctgac
acaaatccttccttcttccacgttggccatcgacgtaaacttcttctacttgctatcagt
gttgttagcttcttcattggccttatgatggttacagaaggtggactgtacatcttccag
ctgtttgactactatgcctgcagtgggatgactctacttctctttgcaacactgcagtct
ggttgtattggatggatatacggtgcagaccgcttttatgataacatagaggacatgatt
ggatacaagccgttatccctgattaagtattgtttgaaatatgtcactccagtgatatgc
atgggtacgtttgttttttccttgatcaaatacacccctctgaagttcaataacacaatt
gagtatccatggtggggttatgctcttggctggtggttcactctctcctctacactcatg
gtgcctttatttatgatgtacaaagtgagcaccaccccaggtacactgcaacaggtaagc
tgtttctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcctggaaacac
ttactgtag
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