Sander vitreus (walleye): 144517412
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Entry
144517412 CDS
T11640
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
svit Sander vitreus (walleye)
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svit03041
]
144517412
Spliceosome [BR:
svit03041
]
Common components
Common spliceosomal components
General mRNP proteins
144517412
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_5
RRM_occluded
RBD_DEAH11
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
144517412
NCBI-ProteinID:
XP_078105641
LinkDB
All DBs
Position
4:37563709..37575908
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AA seq
495 aa
AA seq
DB search
MADDLDIEEMLDAPYRRDEPKNLSPNGEEERTKKKKRSRSRDKKRSRSRDRKRSRSRERK
RSRSRDKRRSRSRERRSSRERGGRYRDHHKHRRRSKSKSPVRKEKSPVRLPVDTLTPEER
DARTVFCMQLAARIRPRDLEDFFSAVGNVRDVRMISDRNSRKSKGIAYIEFVEATSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGSAGPMRLYVGSLHFNITEEMLRG
IFEPFGRIESIQLMMDSATGTSKGYGFITFSDADCAQKAMEQLNGFELAGRPMKVGNVTE
RTDSSASFLDSDDLERSGIDLGTTGRLQLMARLAEGSGLQMPPAAQQALQMSGVIAIGAM
AAVSAAMNPGLNMNSGAMNLPSQPLATHCFQLSNMFHPNSEKPPGWEMDIQHDVIEECNK
HGGVVHVYVDKNSAQGNVYVKCPSIPAAMAAVNALHGRFFAGKMITAAFVPLPAYHHLFP
ESATANQLLVPPTRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacctggacattgaagagatgctggatgctccgtacaggagggatgaaccc
aagaacctgagccccaacggagaggaggaacgaaccaagaagaagaagcgcagccgcagc
cgcgacaagaagcgcagccggagtcgagacaggaagcgcagccgcagccgagagcgtaaa
cgcagccgcagccgagacaagagaagaagtcgcagcagagagcgccgcagcagtagagag
aggggcggccgctaccgagaccaccacaagcaccggcggcggtccaagagtaagagtccc
gtgaggaaggagaagagtcccgtcaggctccccgtagatacgctgactccagaggagcgg
gacgcccgcaccgtgttctgcatgcagctggcggccaggatccgcccgcgagacctggag
gacttcttctccgctgtggggaacgttcgggatgtgaggatgatctctgacaggaactcg
cgcaagtcgaagggcatcgcctacatcgagtttgtggaggcaacatcggttcctctcgca
attgggctgacggggcaaaggctgctgggagttcccatcatcgtacaggcctcacaggcg
gagaagaaccgagcggctgcagcagctgcggccaacagcctgcagaagggatctgcggga
ccgatgaggctttacgtcggctctctgcacttcaacatcaccgaggagatgctgagagga
atctttgagccgtttggacggattgagagcatccagctgatgatggacagtgccacggga
acctctaaaggctacggcttcatcactttttcagacgccgactgtgcccagaaagcgatg
gagcagctgaatggctttgagctggcgggtcggccgatgaaagtaggaaatgtgacggag
cggaccgactcctcggcctcgttcctcgacagcgacgatctggaacgctccggcatcgac
cttgggaccaccggacgcctgcagctgatggcccggctcgctgagggttcaggtctacaa
atgcctccagctgctcagcaggctctgcagatgagtggagtgatcgctatcggagccatg
gctgctgtgtcagctgcgatgaatccgggtctcaacatgaattctggtgcgatgaatctt
ccctctcagccgctcgctactcactgcttccagctctccaacatgttccacccaaacagt
gagaagcctcctggctgggagatggatatacagcatgatgtcattgaggaatgtaacaaa
catggaggagtcgtccacgtctatgtcgacaaaaactctgcacagggaaacgtttacgtt
aagtgtccgtcgatccctgccgccatggccgccgtcaacgctctgcacggacgattcttt
gccgggaagatgatcacggcggcgttcgttcctctgccggcctaccaccacctgttccca
gaatctgccacagccaatcagctgctggtcccgcccacaaggcggtga
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