Sander vitreus (walleye): 144517534
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Entry
144517534 CDS
T11640
Symbol
cacna1ba
Name
(RefSeq) LOW QUALITY PROTEIN: calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
svit Sander vitreus (walleye)
Pathway
svit04010
MAPK signaling pathway
svit04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
144517534 (cacna1ba)
04020 Calcium signaling pathway
144517534 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svit04040
]
144517534 (cacna1ba)
Ion channels [BR:
svit04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
144517534 (cacna1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
144517534
NCBI-ProteinID:
XP_078105744
LinkDB
All DBs
Position
5:8382752..8561609
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AA seq
2202 aa
AA seq
DB search
MFAVVYAVVILATVGADFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGL
LLFFAILMFAIIGLDFYMGKFHRTCFRIDTDEQAADFPCGLEAPARTCANGTACREYWIG
PNYGITNFDNILFAVLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLN
LVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEE
KSLDGAWYKRKNNNSVLKRTKKSKNDLINAEEGEDHFTDISSAAPPGSPFTRASLKSKNE
NSSYFRRKEKRIRFTIRRLVKSQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTFALYLAEF
VFLGLFLAEMSMKMYGLGPQNYFHSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRA
LRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFED
ETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHRGMFSSIYFIVLTLFGNYT
LLNVFLAIAVDNLANAQELTKDEEEQEVAINKKIALQKAMEVKEVSPMSATNMSITAKEQ
QKSMKTMSVWEQRANQLRRQNQASCEALYSELDLEERLRLSSALNIRPDMKTHLDRPLVV
EPRDGPLLAGHQHHHHKSSMPEEAETATDRAPPVPHQARRHHRHRDRDRARTREVTNDNS
GTSKDGGHHVHHSRSKDHDSSRGKEGKSERSRSQEGGRRHHHQSSVDDSGGGGAMSEREH
RHHHSHRQSRGGNGTVNSGGRGERRSRHKNGRSSNRDGDRNSRGDSGANGERRRHQTHGS
RGQSTVEGEVSNEREKSHRFGDSEGELLAISPQQGSEGGNCPDRPEDSDNQRNITRTGQT
SIHVPPVTITSPPGDTTLIQINSIDCETMPMNEKALADRGQSGPKPILPYSSMFIFGQTN
PVRRLCHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTNAPRNNVLKYLDYAFTGVFTFE
MVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGTKGKDISTIKSLRVLRVLR
PLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKV
LQKDCKGQFLYYDRDEVAAMPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDA
TFEDTGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNER
ACIDFAINAKPLTRYMPQNMQSFQYRMWKFVVSAPFEYSIMIMIALNTVVLMMKFHGAPD
FYEAMLKNLNIVFTTLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINT
TDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIG
MQVFGNIEMNEDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDKLSGSD
GEECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAE
YDPAACGRIKYLDMYQMLLHMSPPLGLGKKCPPRVAYKRLVKMNMPIADDNSVHFTSTLM
ALIRTALGIKLASGMVAQRISDYELKKELSTVWPSLSQKTMDLLVTPHKHNELTVGKVYA
ALMIFDYYKQNRARRLQLQQQQQGTSGSQCKVGALFKPLLPLTHMQEKDLPMMLNSVEPP
SMLQPQPKSHAKSQPQTRPSSNSLNNGGTLQGHDHNIKASSSWAMEKPKEAPRAKTKRTM
SRGPSEDTPDTAIIQESVEMSEMETSASSTIPVPGSGLENQGRAASMPRLSAELQRSHSR
HSPGIHLASVPDASPMKRSASTAAPQRPQEVNLRDYTLEKPSQDRPHHHHHHHRCHHRRD
RDRDKDREKRQRSLDAPLGGQPLSSAGATEDPESDPAASRERAHDRGRSHDRKHHSSADK
QRYYSCDRYCSREHCHTKSATTSCAASPSEGQETSTKQGSGWVKGSPVALSSSSSTPSRG
RRQLPQTPLTPRPGVAYKTANSSPVHFVSSQASLSPGRLSRGQSEHNTLRQSGSHHFPCP
VTRISSEPFLAQGHGEALGRLYGSLRDQLDVFQDAVSRSPSPCAGHSSRTALPCMMGALL
PAQQQNLGVPNGYHFSFGGRTSPGSGVRAPRYYQEAEEDXWC
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgtagtgtacgccgtagtgatcttggccactgtgggggcagattttgatcta
agaacactgagggcagtgagagtactgcggccgctcaaactggtctctggcattccaagt
cttcaggtggtattgaagtccattatgaaagccatggtacctctgctacagattggcttg
ctgctcttcttcgccatcctcatgtttgccatcatcggcctcgacttctatatgggcaag
ttccatcgcacctgcttcagaatagacacagacgagcaagctgcagatttcccatgtggc
ctggaggctccggcgaggacctgtgccaacggcaccgcctgcagggagtactggatcgga
cccaactatggcatcaccaactttgacaacatcctcttcgctgttctcactgttttccag
tgcatcaccatggagggatgggtggacattctctataacgccaacgatgcctcagggaac
acgtggaactggctttacttcatccccctcatcatcatcggttccttcttcatgctcaac
ctggtgttaggtgtgctgtcaggggagtttgctaaggagcgagagcgggtggagaagagg
caagaattcctgaaactccgcagacaacagcaaatagagagagagttaactgggtacctg
gagtggatctgcaaagcagaggaggtgatgctggccgaggaagacaagaacgcagaggag
aaatctctggatggagcatggtacaaaaggaaaaacaacaactctgtgctgaaaaggacc
aaaaagagtaagaatgacctcatcaatgcagaggaaggcgaagaccacttcactgacatc
tcatctgctgcccccccagggtcgccgttcacccgggccagcttgaagagcaagaacgag
aactcgtcttacttcaggaggaaagagaagagaattcgcttcaccatccgccgtctggtc
aagtcccagagcttctactggactgttttgtgtctggttggcctcaacacgttgtgtgta
gccatagtacactatgaccagcctgaatggctcacctttgcattatacctggccgagttt
gtattcctgggcctgtttctggcagagatgtccatgaaaatgtatggcctcggaccccag
aattacttccactcctcattcaactgttttgactttggggtgattattggcagtattttt
gaggtgatctgggctgccatcaaacctggggcctcatttgggatcagtgtcctgcgggct
ctgagactgctcaggatcttcaaagtcaccaagtactggaactccttgaggaacctggtc
gtatcccttctcaactccatgaagtctattatcagcctgttgttcctcctcttcctcttc
atcgtggtcttcgctctgctgggcatgcagctgtttggtggccaatttaattttgaagat
gaaacgccaacaaccaactttgacacattcccagcagcaattctcactgtcttccagatc
ctaactggggaagactggaacgcagtcatgtaccatgggatcgaatcacaggggggcgtt
cacagggggatgttctcctccatttatttcattgttctcactctctttggaaactacaca
ctcctcaacgtgttcttggccattgctgttgacaacctcgcaaatgcccaggagctcact
aaggatgaagaggagcaagaggtggccatcaataagaagatcgcactccagaaggccatg
gaggtaaaggaggtcagccccatgtcagccactaacatgtccatcacagctaaggagcag
cagaagtcaatgaagacaatgtcggtgtgggagcagagggccaatcagctgaggaggcag
aaccaggcgagctgcgaggccctctacagtgagctggatcttgaggagcgtcttcgcctg
tcctcggccctgaacatccgacctgacatgaagacccacctcgatcggccgctggttgtt
gagcctcgggacgggcctttgctggccggccatcaacaccaccatcacaagtcctccatg
ccagaggaggcagagactgccactgaccgcgcccctcctgtgcctcaccaggcccgtcgc
caccaccgtcacagagacagggaccgggccagaacaagagaggtgacgaatgataacagt
ggcaccagtaaggacggaggccaccacgtccatcacagccgctccaaagaccatgacagc
agccggggcaaagaggggaagagtgagaggtcccgaagccaagaaggaggcaggagacat
caccatcagagctcagtggatgacagcggaggtggaggagctatgagcgagagagagcat
cggcatcatcattcacaccggcagtcccgagggggcaatgggacagtgaacagtggcggg
aggggagagcgcagatcccgccacaaaaatggacgttcgtctaacagggatggggatagg
aattccagaggagacagtggtgccaatggagagcggaggagacatcagactcatggatcc
aggggccaatccacagttgaaggagaggtgtccaacgagagagagaagagtcacaggttt
ggtgactcagagggtgagttgctcgccatctccccccagcagggctctgaagggggcaac
tgtcctgaccgaccagaggactcagacaaccagaggaacatcacacgaactggccaaacc
tccatccacgttcctcctgtgactatcacttccccacctggagataccaccctcatacaa
attaacagtattgactgtgagacaatgcccatgaatgagaaggccctggcagatcgaggt
caaagtggacccaaacccattctgccttacagttctatgttcatcttcggacagactaat
ccggtgaggcggttatgtcattacattgtgactctgcgttattttgagatgtccattctg
gttgtcattgctatgagcagtatcgctttggcagcagaggaccctgtttggacgaacgcc
cctcgcaacaatgtgctcaaatatctggattatgccttcactggtgttttcacttttgaa
atggtgatcaagatggtggaccttggcctgttgcttcatcctggagcctacttcagagac
ctgtggaacattctggacttcatagtggtcagtggggcgctggtggcgtttgcattttcg
gggaccaaaggcaaagatatcagcactatcaagtcactgagggttctccgagtgctcagg
cctctcaagaccatcaaacgtctgccaaaactcaaggcggtgttcgactgcgtggtcaat
tctttgaagaacgtgctgaacatcctcattgtttacatcctcttcatgttcatctttgct
gtcatcgcagttcagctcttcaagggaaaattcttctactgcacagatgagtccaaggtc
ctgcagaaggactgcaaaggacagttcctctactacgacagggacgaggtggccgccatg
cccagagagtggaagaaatatgagttccattacgacaatgtgctgtgggccttcctgacc
cttttcactgtctccactggggagggctggccaactgttttgaagcactctgtggatgct
acctttgaagacacaggtcctagtccaggctaccgaatagaaatgtccatcttctatgtg
gtctactttgtggtcttccctttcttttttgtcaacatctttgtggctctgatcatcatc
accttccaggagcagggagacaaggcattgtctgagtgcagcttggaaaagaatgagagg
gcttgtattgactttgccataaacgccaaacctctgacacgctacatgccccagaacatg
cagtccttccagtacaggatgtggaagtttgtggtgtcagctccatttgagtactccatc
atgatcatgattgctctcaatactgtggtactcatgatgaagtttcatggagctccagac
ttttatgaagcaatgctgaagaacctcaacatagtcttcaccactctcttctctctggag
tgtatcctcaagatcattgcttttggtccattgaactacttaaaggatgcttggaacgtg
tttgactttgtcacagtgttgggcagcatcactgacatcctggtgactgaaatcaatact
acggacagactgctgaacctgagcttcctgaggcttttcagagccgctcggctcatcaag
ctgttgagacagggctacaccatccgcatcctgctgtggaccttcgtccagtcctttaag
gccctgccttatgtttgccttctgattgctatgctgttcttcatttatgccatcattggg
atgcaggtgtttggcaacattgagatgaatgaggacacagctatcaatcaccacaacaac
ttccgcacattcctccaagcgctcatgctgctgttcaggagtgcaactggtgaggcctgg
cacgagatcatgttatcatgtttgagtcatcgagcctgtgacaagctatcagggtccgat
ggggaagagtgcggcagtgatttcgcatacttctactttgtctcctttatcttcctctgc
tccttcctgatgctgaacctgtttgtggctgtcataatggataactttgagtacctaacc
agagactcctccatcctggggcctcatcaccttgatgagttcatccgggtttgggctgag
tacgacccggctgcatgtggccgtatcaagtacctcgatatgtatcagatgctgctccac
atgtccccacccttaggtttgggaaagaaatgtccgccaagagtcgcctacaagcgcctc
gtcaaaatgaacatgcccatcgctgatgacaacagcgtccatttcacctccactctgatg
gccctgattcgcactgccctggggatcaaactggcctcaggcatggtagctcagcgaata
tctgactatgagttaaagaaggagttgtcgacagtgtggcccagcctctctcaaaagacc
atggatctgttggtgacgccacataaacacaatgaactgacggtagggaaggtttatgca
gccctgatgatcttcgactactataagcagaatcgagcgaggaggctgcagctgcagcag
cagcaacaaggcacatcaggctcccagtgcaaggtcggggctctgtttaagccattgctg
cctctgactcacatgcaggagaaagatctacctatgatgttaaacagtgtggagcctccg
agcatgcttcagccccagcccaaatcccatgccaagtcccagccacagaccagacctagc
tccaactccctcaacaatggaggcacactgcaaggccatgatcacaacatcaaggcatca
tcttcttgggcgatggagaaacccaaggaagcaccccgagctaagaccaagagaacgatg
tccaggggcccatctgaggacacaccagacactgccatcattcaggagtcggtggaaatg
agcgagatggagaccagtgccagcagtacaatcccagtccctggctcaggtctggagaac
cagggcagagctgcctctatgcctcgactcagtgctgagctgcagcggagccactcacgc
cactctccagggatccatctagcttctgtccctgatgccagccctatgaagcgctcagcc
tccactgcagccccacagcggccccaagaggtcaacctgcgggactacaccctggagaaa
cccagccaggaccgaccccaccaccatcaccatcaccaccgctgccaccatcgcagagac
agggacagagataaagacagagagaagaggcagaggtctttggatgcacctctgggtgga
caaccacttagctctgctggtgcaacagaagatccagagtctgacccagctgcctccaga
gagcgagcccacgaccgtggacgctcccatgacagaaaacaccactcctcagcggacaag
cagcgctactactcctgcgaccgctactgcagtcgggaacactgccacaccaaatctgcc
accaccagctgtgccgcctcccccagcgaggggcaggaaaccagcaccaagcagggcagt
ggttgggttaaaggaagcccagtggcactgagctccagttctagcacaccaagccgcgga
cgtcggcagctcccccagacccccctcaccccgcggcccggggttgcctacaagactgcc
aattcatcccctgtgcactttgtgtccagccaggcctctctgagtcctggccgactgagc
cgcggccagtcggagcacaataccctccggcaaagcggctcccaccactttccctgcccc
gtcactcgtatcagctccgagcctttcctggcccagggccacggtgaggccctgggcaga
ctctacggcagcctccgtgatcagctggacgtctttcaggatgcggtgtcacggtcgccc
agcccctgtgccgggcactcatctcggaccgcactgccttgcatgatgggagccctgcta
cctgctcagcagcagaaccttggggtacccaacgggtaccacttcagctttgggggcaga
accagcccaggctctggcgtcagggcacccaggtattaccaggaggcagaggaggactaa
tggtgctag
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