KEGG   Sander vitreus (walleye): 144518573
Entry
144518573         CDS       T11640                                 
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
svit  Sander vitreus (walleye)
Pathway
svit03030  DNA replication
svit03410  Base excision repair
svit03420  Nucleotide excision repair
svit03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:svit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    144518573 (rfc5)
   03410 Base excision repair
    144518573 (rfc5)
   03420 Nucleotide excision repair
    144518573 (rfc5)
   03430 Mismatch repair
    144518573 (rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svit03032]
    144518573 (rfc5)
   03036 Chromosome and associated proteins [BR:svit03036]
    144518573 (rfc5)
   03400 DNA repair and recombination proteins [BR:svit03400]
    144518573 (rfc5)
DNA replication proteins [BR:svit03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    144518573 (rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    144518573 (rfc5)
Chromosome and associated proteins [BR:svit03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    144518573 (rfc5)
DNA repair and recombination proteins [BR:svit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     144518573 (rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    144518573 (rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_11 RCF1-5-like_lid AAA_22 AAA_lid_RFC1 RuvB_N ResIII AAA_14 DEAD AAA_24 DUF815 AAA_assoc_2 PhoH AAA_16 AAA_7 nSTAND_NTPase5 AAA_19 ATPase_2 AAA_5 TIP49 AAA_30 nSTAND3 AAA_2 DNAX_ATPase_lid Thioredoxin_6 RNA_helicase
Other DBs
NCBI-GeneID: 144518573
NCBI-ProteinID: XP_078107469
LinkDB
Position
5:27742395..27749905
AA seq 335 aa
MTSTSKVSLQARNLPWVEKYRPQKLDDLISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACAKQLYKEKEFNSMVLELNASDDRGIDVVRGPVLSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EYVVQQESIDINPGGMKAIVTLSSGDMRRSLNILQSTNMAYGKVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTTAYKQILELKTLKGLALHDILTEVHLLIHRVDFPPAIRIGLLIKLA
DIEHRLASGTDEKIQLSSMVAAFQAVRDLVVSEAS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgacttctacaagtaaagtgtcgttacaggctagaaacttaccatgggttgaaaaatac
agaccacagaaacttgatgatctgatctcacacaaagatattctaagcaccatccagaag
tttattagtgaggacaagcttccccatctcttgttctatggcccccctggaacgggcaaa
acctccaccatcctcgcctgtgccaaacagctgtacaaggaaaaagagttcaactccatg
gtgttggagctaaacgcatcagatgacagaggtattgatgttgtacgaggtcccgttctg
agttttgccagcaccaggaccatcttcaagaagggtttcaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagtttaca
gaaaacactcgattctgcctgatctgcaactacctgtccaaaatcatcccagctctgcag
tcgagatgcacaagatttcgctttggcccgctttccccggaccagatgatccctcgtttg
gagtatgtagtccagcaggagagtattgacataaatcccggtggaatgaaggccattgtg
accttatcatcaggtgatatgagaagatcgctcaacatactgcagagcaccaatatggca
tacgggaaggtcaccgaggacacagtgtacacctgcacagggcaccccctccgctcagat
atagccaacatcctcgactggtccctcaacaaagacttcaccacagcgtacaagcaaatc
cttgagttgaagactttgaaaggtttggccctgcatgatatcctcaccgaggttcatctg
ctcatacacagagtggactttcctccagccattcggataggtctgctcatcaagttggct
gacattgaacaccgactcgcctcgggaaccgatgagaagatccagctcagctccatggtt
gcagctttccaggcagtgagagaccttgtggtcagcgaggcctcctag

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