Sander vitreus (walleye): 144518573
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Entry
144518573 CDS
T11640
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
svit Sander vitreus (walleye)
Pathway
svit03030
DNA replication
svit03410
Base excision repair
svit03420
Nucleotide excision repair
svit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
144518573 (rfc5)
03410 Base excision repair
144518573 (rfc5)
03420 Nucleotide excision repair
144518573 (rfc5)
03430 Mismatch repair
144518573 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svit03032
]
144518573 (rfc5)
03036 Chromosome and associated proteins [BR:
svit03036
]
144518573 (rfc5)
03400 DNA repair and recombination proteins [BR:
svit03400
]
144518573 (rfc5)
DNA replication proteins [BR:
svit03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
144518573 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
144518573 (rfc5)
Chromosome and associated proteins [BR:
svit03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
144518573 (rfc5)
DNA repair and recombination proteins [BR:
svit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
144518573 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
144518573 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
RCF1-5-like_lid
AAA_22
AAA_lid_RFC1
RuvB_N
ResIII
AAA_14
DEAD
AAA_24
DUF815
AAA_assoc_2
PhoH
AAA_16
AAA_7
nSTAND_NTPase5
AAA_19
ATPase_2
AAA_5
TIP49
AAA_30
nSTAND3
AAA_2
DNAX_ATPase_lid
Thioredoxin_6
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
144518573
NCBI-ProteinID:
XP_078107469
LinkDB
All DBs
Position
5:27742395..27749905
Genome browser
AA seq
335 aa
AA seq
DB search
MTSTSKVSLQARNLPWVEKYRPQKLDDLISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACAKQLYKEKEFNSMVLELNASDDRGIDVVRGPVLSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EYVVQQESIDINPGGMKAIVTLSSGDMRRSLNILQSTNMAYGKVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTTAYKQILELKTLKGLALHDILTEVHLLIHRVDFPPAIRIGLLIKLA
DIEHRLASGTDEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacttctacaagtaaagtgtcgttacaggctagaaacttaccatgggttgaaaaatac
agaccacagaaacttgatgatctgatctcacacaaagatattctaagcaccatccagaag
tttattagtgaggacaagcttccccatctcttgttctatggcccccctggaacgggcaaa
acctccaccatcctcgcctgtgccaaacagctgtacaaggaaaaagagttcaactccatg
gtgttggagctaaacgcatcagatgacagaggtattgatgttgtacgaggtcccgttctg
agttttgccagcaccaggaccatcttcaagaagggtttcaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagtttaca
gaaaacactcgattctgcctgatctgcaactacctgtccaaaatcatcccagctctgcag
tcgagatgcacaagatttcgctttggcccgctttccccggaccagatgatccctcgtttg
gagtatgtagtccagcaggagagtattgacataaatcccggtggaatgaaggccattgtg
accttatcatcaggtgatatgagaagatcgctcaacatactgcagagcaccaatatggca
tacgggaaggtcaccgaggacacagtgtacacctgcacagggcaccccctccgctcagat
atagccaacatcctcgactggtccctcaacaaagacttcaccacagcgtacaagcaaatc
cttgagttgaagactttgaaaggtttggccctgcatgatatcctcaccgaggttcatctg
ctcatacacagagtggactttcctccagccattcggataggtctgctcatcaagttggct
gacattgaacaccgactcgcctcgggaaccgatgagaagatccagctcagctccatggtt
gcagctttccaggcagtgagagaccttgtggtcagcgaggcctcctag
DBGET
integrated database retrieval system