Sander vitreus (walleye): 144519854
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Entry
144519854 CDS
T11640
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
svit
Sander vitreus (walleye)
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svit04121
]
144519854 (wdtc1)
Ubiquitin system [BR:
svit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
144519854 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_NOL10_N
WD40_RFWD3
DSE1_N
TPR_19
PAC11
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
TPR_2
ANAPC3
Beta-prop_WDR41
TPR_1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
TPR_BSK1_C
Beta-prop_WDR19_1st
ASA1
CFAP251_N
TPR_17
TRM82_WD
TPR_16
TPR_Slam
CFAP70_TPR_C
Barstar
TPR_9
Motif
Other DBs
NCBI-GeneID:
144519854
NCBI-ProteinID:
XP_078109456
LinkDB
All DBs
Position
6:complement(18636497..18647150)
Genome browser
AA seq
682 aa
AA seq
DB search
MFRGEAMTAVNITRDILHRQIRDKRASGFQRVYHVTDPFIKRLGLEAELQGHTGCVNCLE
WNERGDLLASGSDDQHAIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILITGAADT
KVHVHDLTVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGVIRQYDLRESSKRSEVL
IDLTEFCGQLVEAKCLAVNPRDNNYMAVGANGPFVRLYDIRMINNYRKSMTQSTSAAVHT
FCERQKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQRPYTFLLPKKCQSATGDVQNGKTTNGVSNGILLPTSHIRFAGSKMRSSSSELP
AHLEMLKQQANDAFARQQWTQAIQLYSLGIHHASCNAMLYGNRAAAYMKRKWDGDHYDAL
RDCLKALTLNPGHLKAHFRLARCLFELKYVSEALECLDDFKGKFPEQAHSSACDSLDKDI
KAALFTKTETAAEDKKANSSIRFHSFSRKESIPEDELVLRERSFDYKHRYCGHCNTTTDI
KEANFFGSKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGI
DPVVRLWSPRPETETENGRVVEDMESAAQANQRRMNADPLEVMLLNMGYRITGLRGVGLH
GVGPDGSDDEDSSEGQVQCRPS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtggtgaggccatgactgctgtcaacatcaccagagacatcctgcaccggcag
atcagagacaagagagcatcaggcttccaaagggtctatcatgtgactgaccctttcatc
aaaagacttggactggaggctgagcttcagggccatactggctgtgtgaactgtttggag
tggaatgaacgaggagatttactggcctctggctcagatgatcaacatgccatcatctgg
gatccattcaaacacaagaagcttacaactatgcacacaggtcatgcagcaaatatattc
tctgtaaagttcctccctcactccggggacagaattttgataacgggtgcagccgacaca
aaggtccatgtgcatgacctgacggtgaaggaaaccatccatatgttttctgatcatacg
aacagagtcaaacgcatcgccacagcacccatgtggcccaacaccttctggagtgctgcg
gaggatggcgtcatcagacagtatgacttgagggagagcagtaagcgctcagaggtgctt
attgacctgacggagttctgtggtcagctggttgaggccaagtgtctagctgtcaaccca
cgggacaacaactacatggcagtaggagccaacgggccttttgttcgcctttatgacatc
aggatgattaacaactacaggaaatctatgactcagagcacatcagcagccgtgcacaca
ttctgtgaaagacagaagcccatcccagacggagccgggcagtattatgttgcagggcac
ctgccagtgaaactcccagactacaataatcgcctgagggtcctggtggccacctatgtc
accttcagtcctgatggcactgagctactagttaacatgggtggtgaacaggtgtatctg
tttgacttgacatttaaacagaggccatacactttcttgcttccaaaaaagtgccagtca
gcaacaggagatgtacagaacggaaagacaaccaatggcgtctccaatggaattctcttg
ccgaccagccatattcgatttgctggaagcaagatgcgctctagttcttctgagctcccc
gctcacttggagatgttaaagcaacaagctaatgatgcgtttgcacgtcagcagtggacg
caggccattcagctgtacagtttaggcattcatcatgccagctgcaacgccatgctgtat
gggaaccgggcagcagcatacatgaagcgcaagtgggatggagaccattatgatgctctc
agggactgcctgaaggctctgactctaaaccctggtcatctgaaggctcattttaggctg
gcacggtgtctgtttgagctgaagtatgtgtccgaagctctggagtgtcttgatgatttc
aaaggaaagtttccagagcaggcgcacagtagtgcctgcgattccttggataaagatatc
aaggctgcactcttcaccaagacagaaacagcagcagaagataagaaggccaacagctcc
attcgattccactcattcagtcggaaggagtccatccctgaagatgagttggtgctgaga
gagcgcagctttgactacaagcacagatactgtggtcactgcaacaccaccactgatatc
aaagaggccaacttctttggaagcaaaggccaatacattgtcagcggctcagatgacggt
tccttctttatctgggaaaaggagaccactaatctggtgaggatcctgcagggagatgag
tccatagtcaactgcctgcagccacaccccagctactgcttcttggctacgagtggtatt
gaccctgtggttcgattatggagccccagaccagagacagagactgagaacgggcgagtg
gtggaggacatggagagtgctgctcaggcgaaccagcgacgtatgaacgctgatccgctg
gaggtaatgctgctcaacatgggctatcgcatcacaggcctgcgtggcgtcggcctgcat
ggcgtcggcccggatggctcagatgacgaagacagctcagagggacaagtacagtgtcgg
ccaagctaa
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