Sander vitreus (walleye): 144520197
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Entry
144520197 CDS
T11640
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
svit Sander vitreus (walleye)
Pathway
svit04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
144520197 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svit04040
]
144520197 (scn8aa)
Ion channels [BR:
svit04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
144520197 (scn8aa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
FraC
HpsJ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
144520197
NCBI-ProteinID:
XP_078109993
LinkDB
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Position
7:15862272..15901505
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AA seq
1959 aa
AA seq
DB search
MAAPLIAPPGPDSFKKFTLESLVTLELRINEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDIPKGLVAVPLEDLDPYYLKSQKTFIVLNRGKTIFRFSATPALYFISPLN
PVRRVAIKILIHALFSMIIMFTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINTTKAIDWNEYIM
NETNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLALFRLM
TQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATMEEALQ
KEEEFKAMLDQLKKQQEDAQAAAMATSAGTVSEDAVEDDGGGHLSCSSSEMSKLSSKSAK
ERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMNQSLLSIP
GSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRGSLFSPYRRSSYSGY
HGKRNSTVDCNGVVSLIGPGHGGRLLPEVKIDKAAPDDSPTTEVEVKKKLSGSLMVSVDQ
LNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECSPLWIKIKETM
NLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAGEMLFKLVA
MDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIK
IIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISLDCELPRWHMNDFFHSF
LIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLA
ATDDDGEPNNLQISVRRIKIGIAWIKAKLRILVASLLKKPQMEDEQKPLDDMYDKKLNCI
ANHTGVDINRDLDYVKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVGESDF
ENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVVEEVVVEPVEEYLEPEACWTDGC
VAKYKCCDVDISTGWWKRWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQR
KTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLVANALG
YSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMG
VNLFAGKYYYCFNQTSEEYFPVDVVNNKTQCEALMQQNYTEVRWKNVKINFDNVGAGYLA
LLQVATFKGWMDIMYAAVDSREVEDQPDYEVNIYMYIYFVVFIIFGSFFTLNLFIGVIID
NFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGMVFDFVTQQVFD
ISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFTTEFLLKLFALRHYYFTNGW
NIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALM
MSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIILFMITTSA
GWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGILFFVMYIIISFLIVVNMYIAII
LENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADALEHPLRVPKPN
TIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANPSKVSYEP
ITSTLRRKQEDVSARTIQNAYRVHLIRRGIIFKRRTFTNNKFENGGTNQEKKESTPSTAS
LPSYDSVTKPDKEKQDENKEDWARKEKDKNQKDEWESKC
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttattgcaccgccaggacctgatagcttcaagaagtttactttggaa
tctttggtgacacttgagctgcgcatcaatgaggaaaagaacaagaagccacccaagcag
gacagcagctaccgtgacgatgatgacgagaacaagcccaagccaaacagcgacctggag
gctgggaagagcctgccctacatctacggggacatccctaagggattggtggcggtacca
ctggaagacctggacccatactacctaaagtctcagaaaacatttatagtgctaaataga
gggaagacaatcttccgttttagtgccacgcctgccttgtacttcataagtcctttaaat
ccggttaggcgagtagctattaaaattttgatacatgctcttttcagcatgatcattatg
tttactattttgaccaactgtatattcatgacctttagtgatcctcctgagtggtcaaaa
caagtagagtacacattcacgggaatttatacatttgagtctcttgttaaaatcacggca
cgaggattctgtatagacgggtttacattccttagagatccatggaactggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctctgtcattccaggactgaaaacc
attgtgggcgccctgatccagtctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgcctgagtgtctttgccctcattggtctccagcttttcatgggcaacctgcgccac
aagtgtgtgatctggccaatcaacaccaccaaggccatcgactggaatgagtacatcatg
aatgaaaccaatttctacttcctgcctggccagttggatgctcttctctgtgggaacagc
tccgactctggccgctgcccggagggctacacatgcatgaaagctgggaggaatccaaac
tacggctacaccagctttgacagcttcggctgggccttcctggctctcttccgactcatg
acacaggacttctgggaaaacctttacatgctgaccctgagggcggcagggaagacatac
atgatcttctttgtgttggtgatctttgtgggctcgttctacttggtgaatctgatctta
gctgtggtggccatggcttacgaggagcagaaccaggccaccatggaagaggccctgcag
aaggaggaggaattcaaggccatgctggatcagctcaagaaacagcaggaagacgctcag
gcggctgccatggcaacctctgcgggtactgtgtcagaggacgcagtagaggacgatgga
ggaggtcatctgtcatgcagttcctctgagatgtcaaagctcagctccaaaagtgccaaa
gaacggcgtaatcgtaagaaaaagtggcggcagaaagagcaagagaaggagaaaggcgac
agtgagaagtttgtcaagtcagagtcagatgatggcagcaagaggagccgcttccgtttc
cctgataatcgcttgggtcgaaagtcttccattatgaaccagtccctcctcagtatacct
ggctcacctttcctgtcccgccacaacagcaagagcagcatcttcagttttaaggggcgc
ggtaaggacgtgggatcggagaacgagtttgccgatgatgaacacagcacggtggaggag
tgcgaggagcgccggggctccctgttcagcccttatcggcggagcagctacagtggatac
cacgggaagaggaacagcacggtggattgcaacggcgtggtgtcgctcatcggccctggg
cacggtggacgccttctgcctgaggtgaaaatagataaggcagcccctgacgacagtccg
actactgaggttgaggtgaagaagaagctgtcgggctccctgatggtgtctgtggaccag
ctcaatacctcctttgggcggaaagagcgggccaacagtgtcatgagcgtcattaccaac
acactagtggaggaactggaggagtctcaacgcaagtgtccgccatgctggtataaattt
tctaacacattcctgatctgggagtgctccccactgtggattaagatcaaggaaactatg
aacctgattgtcatggaccccttcgtggacttagccatcaccatctgtatcgtcctcaac
accctcttcatggctatggagcactaccccatgacccccgactttgaagacatgctgtct
gtaggcaatctggtgttcacagggatctttgcaggggaaatgctttttaagttggttgct
atggatccatactactacttccaggaggcctggaactgtttcgacggtttcattgtaacg
ctgagtttagtggagctggctctggctgacgttgagggcctgtctgtgctgcggtcattt
cgattgctgagagtgttcaagctggccaagtcatggcccaccctcaacatgctgatcaag
atcatcggaaactcagtgggagccttggggaacctgactctggtgctggccatcatcgtc
tttatctttgctgtggtgggcatgcagctgtttggcaagagctacaaagactgtgtgtgt
aaaatctctcttgactgtgagttgcctcgctggcacatgaatgacttcttccactccttc
ctgatcgtcttccgggtgctgtgcggtgaatggattgaaaccatgtgggactgcatggag
gtggcgggccaggccatgtgcctcattgtcttcatgatggtcatggttatcggtaacctg
gtggtgttgaatctgttccttgccttgctgctgagctcattcagtgctgacaacttggct
gcaacagatgacgacggtgagcccaacaacctgcagatttctgtcaggcgtatcaagatt
ggcattgcatggatcaaagcgaagttgcggatattggtggccagtctgctgaagaaacca
cagatggaggacgagcagaagcctttagatgacatgtatgacaagaagctgaactgcatt
gctaaccacaccggggtggacatcaaccgtgacctggactatgtcaagaatggtaacggc
accaccagcggtattggcagcagtgtgggcaagtatatgattgatgaggaccacatgtcg
ttcatccacaacccaaacctgaccgtctgtgtgcccattgctgtgggagagtctgacttt
gagaaccttaacacggaggatttcagcagcgagtcggaaaatgagaacagcaaagagctg
gatgacaccagttcgtcggagggcagtaccatcgacatcaagccagatgttgtggaggag
gtggtggtggagccagtggaggaatacttggaacccgaggcgtgttggacagatggttgt
gtggccaagtataagtgctgcgatgttgacatttctacgggctggtggaagagatggtgg
tacctgagaaaaacctgctacctgattgtggagcacaactggtttgaaaccctcatcatc
ttcatgatcctcctcagtagcggcgccctggcctttgaggatgtgtacattgagcagagg
aagaccattcggataattttggagtacgccgacagggttttcacctacatcttcatcctg
gagatgttgctgaaatgggtcgcgtacggttttgtcaagtatttcaccaatgcctggtgt
tggctggacttcttcattgtggatgtgtctatagtcagccttgtagctaatgcgctgggc
tactccgatctagggcccattaaatcactcaggacactaagggccttgagacccctcaga
gccttgtcacgttttgaagggatgagggtggtagtcaacgccttggtgggtgccatccct
tccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagtatcatgggg
gtcaacttgtttgcgggcaagtactactactgtttcaatcagacatcagaggaatacttt
cctgtcgacgtggtcaacaacaagacccagtgtgaggccctcatgcaacaaaactatacc
gaggtcaggtggaagaacgtcaagatcaactttgataatgtgggcgccggctacctggcc
ctgctgcaagtggccacattcaaaggttggatggacattatgtatgcagctgtggattcc
agagaggtggaagaccagcccgactatgaagtcaatatctacatgtacatctactttgtc
gttttcatcatatttggctccttcttcaccctcaacctctttattggtgtgatcattgac
aacttcaaccagcagaagaaaaagtttggaggtcaggatatatttatgacagaggaacag
aaaaagtactacaatgccatgaaaaaactggggtccaaaaagccacaaaaacctattcct
cgaccacagaacaaggtccaaggcatggtgttcgactttgtgacgcagcaggtctttgac
atctccatcatgattttaatctgtctcaacatggttactatgatggtggaaacggacgat
cagtcagatgaaacagaaaacgtcctctactgggtcaacttcatctttattgtagtcttc
accaccgagttcttgctaaagcttttcgcccttcgccactattacttcaccaatggctgg
aatatctttgatgtggtggtggtcatcctgtctattgtcggtatgttcctggctgatata
attgagaagtactttgtgtcaccaacactgttcagggtgatcaggttggctcgtattggc
cgtatcctgcgtctgatcaaaggagctaagggcatccgcactttactctttgctctgatg
atgtcactgccagccctgttcaacattggcctactgctcttcctggtcatgttcattttc
tccatcttcggcatgtctaactttggctatgtaaaacacggagcgggaattgatgacttg
tacaactttgagacctttggcaacagcatgatcattctgttcatgatcactacgtcagct
ggatgggacggcttgctgctgccgatcctcaactacccaccagactgcgatcccaatttg
gagaaccctggtacatccgtgaagggtgactgcggtaacccatcagtgggaatcttattt
tttgtcatgtatatcatcatttctttcctgattgtggtcaacatgtacattgccatcatc
ctggagaacttcagtgtggccacagaggaaagtgctgatccactcagtgaggacgacttt
gagaccttctacgagatctgggagaagtttgaccccactgcctctcagttcattactttt
gccaagctctctgactttgccgacgcactggagcacccacttcgtgtgccaaagcccaac
actatagaactaattgccatggatttgcccatggtgagtggcgatcgcattcactgccta
gacatcctgtttgccttcacaaagcgagtgctgggtgacagtggggagttggacatgctg
aggcaacagatggaggagcgatttgtggcagccaacccctccaaggtgtcgtatgaaccc
atcacctccactcttcgccgcaaacaggaggatgtctctgccagaactatccagaatgcc
taccgcgtccaccttattcgacgcggcatcatcttcaagcgtcgtacttttactaacaat
aagtttgagaatggcgggaccaaccaagagaagaaggagagcacaccatccacagcctct
ctcccctcctacgacagtgtgaccaaacctgacaaggagaaacaggatgaaaacaaggag
gactgggccaggaaagagaaggacaaaaaccaaaaagatgagtgggaatcaaagtgttag
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