Sander vitreus (walleye): 144520726
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Entry
144520726 CDS
T11640
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
svit
Sander vitreus (walleye)
Pathway
svit00310
Lysine degradation
svit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
144520726 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svit03000
]
144520726 (prdm16)
03036 Chromosome and associated proteins [BR:
svit03036
]
144520726 (prdm16)
Enzymes [BR:
svit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
144520726 (prdm16)
Transcription factors [BR:
svit03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
144520726 (prdm16)
Chromosome and associated proteins [BR:
svit03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
144520726 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
SET
zf-C2H2_8
zf-BED
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
144520726
NCBI-ProteinID:
XP_078110802
LinkDB
All DBs
Position
7:complement(12576319..12757525)
Genome browser
AA seq
1410 aa
AA seq
DB search
MRSKARARKLAKNDSEPVDSMYDTEADLPGLAGGGGTDSPEDDAEDGVINMSPLPSPTPS
HPNNNHHHLLHPHIYATHHHHHLHNNNSSSNDQDFTTPKEGSPYEAPVYIPDDIPIPSEL
ELRESSVPGAGLGVWAKTCIGAGERFGLHSTLHHEATGKDSSFGWEQMMNDHDEASPDSC
IKKVVDNMGNVKFALDTGPDATSNSWLKYVRSAPSFEDQNLAACHLTGDQIYYKAVRDID
AGEELLVYMKDGIFPEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCSSSGSIFD
TLREDFKQEREDSDEPVHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSN
LIRHQMSHDSGKRFECENCDKVQHTRHVFTDPSNLQRHIRSQHVGARAHTCPECGKTFAT
SSGLKQHKHIHSSVKPFICPDGLRLFAPPGEVCHKSYTQFSNLCRHKRMHADCRTQIKCK
DCGQLFSTTSSLNKHRRFCEGKNHYGSPAGMFNPGIPMSSSPIMAKAKSHHPHLQGLNQS
GLGFTDYFPSRPHPHTSLPFSPGPHGFPSLPHGFPGIFSPSLYPRPPLLPASPLLKQSGG
SQEVKLPRSPLDAPPLSLVSSTNSNGGYSLSQLEDREKENKLDLSSGEAKPKSKMADMSD
ASDLEDVNTTSGTDLDTTTGTASGDGSDLESDGESERERSGKRRKPSGAISSQEGHQLED
TNSALISAVSSSGNFAIDRPFLSSASSQHSFFPPPDEQALPPTNTNANASTDSIKAIASI
AEKYFGPGLIGLHQEKKMGPLPYHSMFPFQFLPNFHNSLYPFSADRGALNPSMFFKAEPK
SPREQLHKMVSGAPGAPASTGESPFDLTTKPKETKLAPPTPTNPSNPSSTGSSSGHLAIS
SGEEQPLDLSIGGRNRGGHNGVAAEPQNRKNHIFGIGKGVSIKDETPSGFPHAHSQLLPQ
SSIAQHQQPQAQPHQPPPLHYAKPSAFFMDPIYSRVEKRKLLDPVGALKEKFLRPSPPLF
HPQMSAMENMTEKLESFGALKLDVPPNSLQHAHPLFNFRSPPPSLSDAILRKGKERYSCR
YCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCN
RCFGQQTNLDRHLKKHEHENIPVSQQSGMLSNLGTTISSPNSEPDNHALLDEKEDSYFSE
IRNFISNSEMNQASSSSDKRSDQAEEERPPSHSLSNSKLRLQGLEEEEEEVEGDDEEEEE
GSLTEKSHDEAPESPSPVTTGVYEEDEEEDETETAPLAMSYEHTRRCIEEEGSLLDLEGL
PSFPKSLEGLRKAARDEQPYDVKDLFNTSLESEALKETLYRQAKTQAYAMMLSLSENNPL
HVPSQNSLDAWLSMGSGPSETSSFHPLNHI
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggctagaaaactggccaaaaatgacagcgagccagtggacagc
atgtacgacacagaggccgacctcccgggtttagcaggcggaggtggtaccgacagccca
gaagacgacgcagaagacggcgtaatcaacatgtcccccctgccctcaccaactccttcc
catccaaacaacaaccaccaccacctgctgcacccccacatctacgccacccaccaccac
caccatcttcacaacaacaacagcagcagcaatgaccaggacttcaccacacccaaggag
ggctcgccctatgaggcgcctgtctacattcccgatgacattcccattcccagcgaactg
gagctgcgggagtcctctgttcctggtgccggcctgggcgtttgggccaagacctgcatt
ggtgctggcgagaggtttggtctgcacagcacgctgcatcacgaggccacgggcaaagac
agctcctttggatgggagcagatgatgaatgaccatgatgaagcctcccctgacagctgc
atcaaaaaggtggtggacaacatgggcaacgtcaagtttgcgctggacacaggcccggat
gccaccagcaacagctggcttaaatacgttcgctctgccccgtcatttgaggatcagaac
ctcgccgcctgtcacctcaccggagaccagatttattataaagctgtccgggacattgac
gcaggggaggagctcttagtgtatatgaaggacggaattttccccgagggatccatggca
cccaacctacaagatgagcagatgtaccgctgtgaagactgtgatgagctgttctcctca
acacttgagctgcggcggcaccagaagtactcgtgctccagttccggctccatctttgac
acactgagagaggacttcaaacaggaacgcgaggacagcgacgagcctgtccacgagtgt
aaagactgtgagaagatctttccaaatgagtacagtctgggccaacacatgatagtccat
acagaggagagggagtacaagtgtgaccagtgccccaaagccttcaactggaagtccaac
ctcatccgtcaccagatgtcacatgacagtggcaagcgctttgagtgtgaaaactgtgat
aaggtacagcatacccggcacgtgttcacagatcccagcaaccttcagcgccacatccgc
tcccagcacgtgggggcgcgcgctcacacatgtcctgagtgtggcaagacctttgccacc
tcgtcaggcctcaaacagcataagcacatccacagcagtgtcaaaccctttatctgccct
gatgggctgcgtctttttgctcccccaggcgaggtgtgccacaagtcctacacccagttc
tccaatctctgccgccacaagcgtatgcatgctgactgccgcacccagatcaagtgtaag
gactgtgggcagttgttcagcactacctcctccctcaacaagcatcgccgcttctgtgaa
ggcaaaaaccattatggctcgccggcagggatgttcaaccctggcatccccatgagctcc
agccccatcatggccaaggccaagtcccaccatccccaccttcaaggtctaaaccagtca
ggtttaggcttcactgactactttccctcccgacctcaccctcacactagtttgcccttc
tccccaggaccccatggcttcccatccctccctcatggtttcccaggtatcttctcccca
tcactgtatccacgaccacctttattgccggctagtccgttgctaaagcagtctggaggc
agtcaggaggtgaaactgcctcggagtcccctagatgcccctccactgtccctggttagc
tccacaaacagcaatggaggttacagtttgagtcagctggaagacagagaaaaagagaac
aaactagatttgtcttctggagaagccaagccaaaatctaagatggcagacatgtctgac
gctagtgaccttgaagacgttaataccacaagtgggacagatttggacaccaccactggt
actgcttcaggtgatggttctgacctggagagcgatggagagagtgaacgtgagcgaagt
ggtaaaagaaggaagccgtctggggccatatcaagtcaagaaggccaccagttagaagac
acgaacagtgcgttgatatcagccgtgtctagttctgggaactttgctattgatcgtccc
tttctttcttctgcatcatcccagcactctttcttccctccgcctgatgagcaagccctc
ccgcccaccaacacaaatgccaatgcatccacagattccatcaaagccattgcctctatt
gcggagaaatattttggtccaggtttgattggtctccatcaggagaagaagatgggtcca
ttgccctaccattccatgtttccctttcagtttttgcccaacttccacaactccctttat
cccttcagcgctgatcgaggtgccctcaatcctagcatgttcttcaaggcagagcccaag
tcacctcgcgagcagctgcacaagatggtttctggtgccccaggagctcctgcttccaca
ggggagtccccatttgatctcaccacaaagcccaaggagaccaaattagctcctcccacc
ccaacaaacccttcaaaccctagtagtactgggagcagtagtggacatttagcaatatct
agcggtgaagaacagccattggacctcagcattggtggccggaaccgtggtggtcataat
ggtgtggcagctgagccacaaaatagaaagaaccacatctttggcattggaaagggggtc
tccatcaaggacgaaaccccatctgggtttccacacgcccattcccagttgttgccccaa
tcctccattgcccagcaccagcagccccaggcacagccacaccagccaccaccccttcac
tacgccaagccctcagcattcttcatggaccccatatacagcagggtggagaagaggaag
ctactcgaccccgtaggagctctgaaggaaaaattcctcaggccctcaccgccactcttc
catccacagatgtcagccatggagaacatgacagagaagctggagagctttggcgctcta
aaactggacgtgccgcccaattcgctgcaacacgctcatccactgttcaactttcgctca
ccaccaccttccctctcagacgccatcctccgcaagggcaaggagcgttactcctgcagg
tattgtgggaaaatattccctcgttctgcaaacctcaccagacacttgcggacacacaca
ggggaacaaccctacaggtgtaaatactgtgaccgctcgttcagcatctcatccaatctt
caacgtcacgtccgcaacatccataacaaggagaaacccttcaagtgtcacctgtgcaac
cgctgcttcggtcagcaaaccaacctcgaccgccatctcaagaagcacgagcatgagaac
attcctgtgagccaacagtccgggatgctttccaacctaggaaccaccatctcctcccca
aactccgagccagacaatcatgcacttttagatgagaaggaggactcatacttctcagaa
atccgcaacttcatttccaacagtgagatgaaccaggcctccagttcctcggacaagaga
tcagaccaggctgaggaggaacgcccacccagccacagtttgtccaactccaagctaagg
ctccaggggctggaggaggaggaagaggaagtggagggcgatgatgaggaggaggaggaa
ggaagcctaacagagaagtctcacgacgaggcgccagagtccccgtctcccgtcacaaca
ggagtgtatgaggaggacgaggaggaggacgagacggagacggctccgttagctatgagc
tatgaacacactcgcaggtgtatagaggaggagggctctctcttggacctggagggcctg
cccagctttcccaagagcctggagggcttacgtaaagcagccagagacgagcaaccctat
gatgttaaagacctatttaacacttcactagagtcggaggcattgaaagagacattgtac
aggcaggctaaaacccaggcttatgcaatgatgctgtctctctcggagaacaaccctttg
cacgtgccctcccagaactctctggacgcttggctgagcatgggaagtggaccgtctgag
acgagcagctttcacccactcaaccacatctag
DBGET
integrated database retrieval system
