Sander vitreus (walleye): 144521559
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Entry
144521559 CDS
T11640
Symbol
slc6a13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
svit Sander vitreus (walleye)
Pathway
svit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
144521559 (slc6a13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svit02000
]
144521559 (slc6a13)
Transporters [BR:
svit02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
144521559 (slc6a13)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
144521559
NCBI-ProteinID:
XP_078112240
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All DBs
Position
8:21082607..21093126
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AA seq
613 aa
AA seq
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MENPSKVEPSNGHNRSLDIVPSTEEKMTDRGQWGNKIEFVLSVAGEIIGLGNVWRFPYLC
YKNGGGAFFIPYLIFLFACGIPVFFLETALGQYTSQGGITCWRKICPLFEGVGYATQVIV
ALLNIYYIVVLAWAVFYLSQSFTWDLPWASCNNTWNTDSCMAFQRGNSSINHHENTTSPV
IEFWERRVLRISSGIDHIGSLNGDLVICLAVAWVICYFCIWKGVKSTGRVVYFTATFPYA
MLVVLLIRGVTLPGASRGIHFYLYPDLGRLSDPQVWMDAGTQIFFSYAICLGCLTALGSY
NKYNNNCYKDCLSLCFLNSGTSFIAGFAIFSILGFMSYEQNVPISEVAESGPGLAFIAYP
RAVSMMPFSPLWACCFFIMIVFLGLDSQFVCVESLVTAMVDMYPATFRRKNRRELLILAV
AVVSFLLGLIMLTEGGMYIFQLFDYYAASGVCLLFVAIFETVCIAWIYGADRFYDNIEDM
IGYRPSPVIKYCWLFFTPATCIGTFAFALIKYSPLKYNNEYVYPWWGYGIGWILALSSML
CIPLWVAMKLYYTPGTLRERLVLLTTPSTDLPKTKLEQEKLLAIFAADSDSLHQKSPPTK
DGYFPVDEKESHC
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagaacccatccaaggtggagccctctaatgggcacaacaggtccctggacattgtg
cccagtacagaggagaagatgacagacaggggtcagtggggcaacaagattgagtttgtt
ctgtcagtggctggagaaattattggcctggggaatgtctggcgtttcccctacctttgt
tataagaacggaggaggtgccttcttcatcccatacctcatcttcttgtttgcttgtggc
atcccggtcttcttcctggagacggctctgggtcagtacaccagtcagggaggcatcacc
tgctggaggaaaatctgccccttgtttgaaggagtgggttatgccacccaggtgattgtt
gctctgcttaacatctactacattgtcgtgttagcctgggccgtcttctatttgtcccag
tccttcacctgggatctgccctgggcctcctgcaacaacacctggaacacagattcctgt
atggcatttcagagggggaatagctccatcaatcaccatgagaacaccacctctcctgtc
attgagttctgggagcgaagagtgctgagaatttcctcaggtattgatcacattggctct
ctgaatggggacctagttatctgtctggccgttgcgtgggtcatctgctacttctgcatc
tggaagggagtcaagtctactggcagggttgtttacttcacagcaaccttcccttatgct
atgctggtggtcctgctgattagaggggttaccctgcctggagcctccaggggaatccac
ttctacctctaccccgacctgggacggctgtctgacccgcaggtatggatggatgctggg
actcagatcttcttctcctatgccatctgcctgggttgcctcactgctctgggaagctac
aacaaatacaacaacaactgctacaaggattgcctgtccctctgtttcctgaacagtggt
accagttttattgcagggtttgccatcttctccatcctgggctttatgtcctatgagcag
aacgtgcccatctcagaagtggctgaatctggtccaggcttggccttcatagcctatcct
cgtgctgtgtccatgatgcctttctcccctctatgggcctgctgcttcttcatcatgatc
gtctttctgggactggacagtcaatttgtgtgtgtggagagcctggtgacagccatggtg
gacatgtatcccgccaccttccggcgtaaaaaccgcagagaactccttatcctggcagtg
gctgtggtgtccttcctcctggggctcatcatgctgacagagggcggaatgtacatcttc
cagctctttgactactatgcagccagtggggtctgcctgctcttcgtggctatttttgag
actgtttgcattgcttggatttatggtgccgaccgtttctatgacaacatagaggacatg
attggctatcgccctagccctgtcatcaaatattgctggcttttcttcactcctgcaaca
tgcattggaacctttgcttttgccttgatcaagtactcacctctgaagtacaacaatgaa
tatgtatatccatggtggggatatgggattggctggatactggccctgtcctccatgctg
tgtatccctctctgggtagcaatgaaactgtactacacccctggaacactgagagagcgc
cttgttctcttgaccactccttccactgatttaccgaagacaaaactggagcaggagaag
ctgctggccatcttcgcagcagacagcgacagcctccatcagaaatcacctcccactaag
gatggctacttccctgttgatgaaaaagagtctcattgctag
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