Sander vitreus (walleye): 144523667
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Entry
144523667 CDS
T11640
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
svit Sander vitreus (walleye)
Pathway
svit04136
Autophagy - other
svit04140
Autophagy - animal
svit04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
144523667 (atg4b)
04140 Autophagy - animal
144523667 (atg4b)
04136 Autophagy - other
144523667 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svit01002
]
144523667 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svit04131
]
144523667 (atg4b)
03029 Mitochondrial biogenesis [BR:
svit03029
]
144523667 (atg4b)
Peptidases and inhibitors [BR:
svit01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
144523667 (atg4b)
Membrane trafficking [BR:
svit04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
144523667 (atg4b)
Mitochondrial biogenesis [BR:
svit03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
144523667 (atg4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
144523667
NCBI-ProteinID:
XP_078115521
LinkDB
All DBs
Position
9:complement(23152425..23160545)
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AA seq
391 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTERDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHVGRDWRWARGQKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVVIEEIK
RLCMPWLDAAGACGGAGELNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINEAYIET
LKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVDPCEDGQVPDETYHCQ
HPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCNRGGLPMFELVDSQPSHMVSV
DALNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagcaaccttgacatacgacacacttcgctttggagagtttgaagatttccct
gagacctcagagcctgtgtggatcttggggaaagaatacaatgcactcacagagagagat
gagattttatcagatgtcacttcacgactgtggttcacatacagaaagaacttcccacca
attggtgggacaggaccaacatcagatacaggatggggatgcatgttacggtgcggccag
atgatcctaggcgaggccttggtgtgtagacatgtaggcagagactggagatgggccaga
ggccagaaacaaagagaagagtacatcagtattctcaacgccttcattgacaaaaaagac
agctattattccatccatcaaattgcccaaatgggagttggagagggaaagcctataggc
cagtggtatggaccgaacacagttgcccaggttttaaagaagctggcagtgtttgacacg
tggagcagattagtcgtacacgtggcgatggacaacactgtggtcatcgaggagatcaag
cgtctctgtatgccctggctggacgctgcaggagcctgtggcggagcgggcgagctcaac
ggctgcctggagggggcgtgtgccctggccgaggaggagacggctctctggaaacctctg
gtcctgctcatccccctcaggctgggcctgagtgatataaatgaggcctacatcgaaacc
ctcaagcaatgcttcatgctgcctcagtccctgggtgttattggggggaaacccaacagt
gcccattacttcattggttatgtcggagaggaactcatctatttagacccacacaccacg
cagcctgcagtggatccatgtgaagatggccaggtccctgatgagacgtaccattgtcag
cacccaccctgccgcatgcacatctgtgaattggacccatccatcgcagcgggtttcttc
tgcagaacagaggacgagtttgacgactggtgtatgcgcataagaaggctgtcctgcaac
agagggggccttcccatgtttgaactagtagacagtcagccctcacacatggtcagcgtg
gatgcccttaatcttactcctgatttctcagactcggacaggttggagcggttctttgat
tcggaagatgaagagtttgagatcctttccctctga
DBGET
integrated database retrieval system