Sander vitreus (walleye): 144523714
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Entry
144523714 CDS
T11640
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
svit Sander vitreus (walleye)
Pathway
svit03030
DNA replication
svit03410
Base excision repair
svit03420
Nucleotide excision repair
svit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
144523714 (rfc4)
03410 Base excision repair
144523714 (rfc4)
03420 Nucleotide excision repair
144523714 (rfc4)
03430 Mismatch repair
144523714 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svit03032
]
144523714 (rfc4)
03036 Chromosome and associated proteins [BR:
svit03036
]
144523714 (rfc4)
03400 DNA repair and recombination proteins [BR:
svit03400
]
144523714 (rfc4)
DNA replication proteins [BR:
svit03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
144523714 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
144523714 (rfc4)
Chromosome and associated proteins [BR:
svit03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
144523714 (rfc4)
DNA repair and recombination proteins [BR:
svit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
144523714 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
144523714 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_22
AAA_16
AAA_11
AAA_30
DUF815
SLFN-g3_helicase
Mg_chelatase
Gp44_lid
AAA_14
RuvB_N
KH_DUF2096_C
AAA_19
AAA_24
AAA_5
ResIII
DNAX_ATPase_lid
Kinesin
Cdc6_lid
AAA_3
AAA_28
AAA_7
Motif
Other DBs
NCBI-GeneID:
144523714
NCBI-ProteinID:
XP_078115599
LinkDB
All DBs
Position
9:25677682..25705071
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQTTRSQKDKAAAGLSTEKKAKAIPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPHLYRQRVLELNASDERGIQVVREKVKN
FAQLTVAGTRPDGKLCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKENLKYTKESIAELVRVSEGDLRKAITFL
QSAARLNVDKEITEQAVLEIAGVVPPKMIDHLLQICFTGTFEKLEVAVRNMVDEGYAATQ
ILSQLHESIIEQDLSDKQKSAITENMAVVSKCLSDGADEYLQMLSLCSVIMQHVSQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagcaactgttcagactaccagatctcagaaagacaaggca
gcagcagggctaagtacagagaagaaagccaaggctattccttgggtagaaaaatacagg
ccaaagtgtgttgatgaggtggcctttcaggaggaggtagtagcagtgctgaagaagtct
ctggaaggagctgatcttcccaacctgctcttctatggccctcctggaacagggaagacc
tcaactatcttagctgctgccagagaactttatggtccacacctgtacagacagagggtg
ttggagctcaatgcctctgatgaacgaggcatccaggttgtccgagagaaggtcaagaac
tttgctcagctcaccgtggccgggactcgtccagatgggaagctgtgtcctccttttaag
atcatcattctggatgaggcggactccatgacggcaccggctcaggctgctctaaggcgg
accatggagaaggagtctcgcaccacccgtttctgcctcatctgtaattacatcagcagg
attattgagcctctgacctccagatgttccaagtttcgcttcaaacctctagccaatcag
atacaagaagagcgcctgctggagatctgtgagaaggagaatctcaagtacaccaaagag
agtattgcagaattggtgagggtgtctgagggagacctgcggaaagccataaccttcctc
cagagtgctgcgcgtctcaacgtcgacaaggagatcacagagcaagctgtccttgaaata
gccggggtcgtccctcccaagatgattgaccatttgctccagatatgcttcacaggaaca
tttgagaagctagaggttgctgtcaggaacatggtggatgaaggctatgcagccacacag
atcctgagtcagctccatgagtctatcatagagcaggacctgagtgacaagcagaagtcg
gccattacagaaaatatggcggttgtcagtaagtgcctgtcagacggtgcagatgagtac
ctgcagatgttgagtctgtgttcagtcatcatgcagcatgtttcccagaacaactaa
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integrated database retrieval system
