Sander vitreus (walleye): 144524182
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Entry
144524182 CDS
T11640
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
svit Sander vitreus (walleye)
Pathway
svit04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
144524182 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
svit00536
]
144524182 (slit2)
Glycosaminoglycan binding proteins [BR:
svit00536
]
Heparan sulfate / Heparin
Axon guidance molecules
144524182 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRRCT
hEGF
EGF_TEN
LRR_1
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
LRR_EndoS
EGF_TGFA-like
EGF_Teneurin
Laminin_G_3
EGF_3
Motif
Other DBs
NCBI-GeneID:
144524182
NCBI-ProteinID:
XP_078116393
LinkDB
All DBs
Position
2:complement(19708656..19796912)
Genome browser
AA seq
1559 aa
AA seq
DB search
MVGALSPVGPGRSPVTALGLLVAVLVSVLSGGADGQPCPAQCSCTGTTVDCHGQGLRSVP
RNIPRNTERLDLNANNLTKITKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRL
NRNNLAVFPELLFLGTTKLYRLDISENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDGA
FRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRL
GLYTQCMAPPHLRGHNVAEVQKKEFACTGHQSSSSSSCSVLQCPESCTCSNNIVDCRGKG
LTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSL
NSLVLYGNKITEISKALFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQT
IAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQ
IKSKKFRCSGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAEL
RLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILTSNRLENIH
HRMLKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDTLHSLST
LNLLANPFNCNCHLAWLGDWLRRKHIVTGNPRCQSPYFLKEIPIQDVAVQDFACEDGNDE
NSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGNHFTQVPVELSNYKH
LTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGNDIS
LIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGPGDMTDKLLL
TTPSKKFTCTGPVDMNVQAKCEPCLSNPCKNDGTCSNDPVHYYRCTCPYGFKGQNCEEPI
HACISNPCQNGGTCHLKEGEGSNFWCVCPEGFEGDGCEINIDDCEDNDCENNSTCVDGIN
NYTCMCSLEYTGELCEEKLDFCAPELNPCQHDSKCILTPQGYKCECTPGYVGEHCELDYD
DCEENKCQNGGQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHECLNGAQCVV
MGSDPRCQCLHGYKGDRCETLVSVNFVNRESYLQLPSSLLSPDTNISLQIATDEDSGVLL
YKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVASDQTLSLSIDG
GPPKSINSISKQSTLNIDSPLYLGGMPERASASGGLSSMQHSSGGRNGTSFHGCLRNLYI
NGKLQDLGVGLGTGTPGSGTAHSTTRQWLGHGVEPGCQPCQRGACVQGDCHPTGHRGFTC
TCHPGWTGTVCDQQVNNPCDGNKCIHGTCLPINSYSYSCRCQPGFAGVLCDEQDQDTANP
CSLSHCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERVRDVYQRQQGYAACQTQE
KVSRLECRGSCPGGAEGQGPCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGCTQCSS
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgagccccgttggccctggccgctccccggtgactgctttgggactg
ctggtggctgttctggtatcggtcctgtccggcggagcggacggccagccctgcccggcc
cagtgctcctgcaccgggactacagtagactgtcacggccaagggctccgcagcgtgccc
aggaacataccccgcaacacggagagactggatctgaatgcaaacaacctcactaaaatc
accaaggcggattttgcaggactgaggcatctgcgagtgttgcagctaatggagaacaaa
atcaccacaatcgagagaggggccttccaggacctgaaggagttggagagactgcgcctg
aatcggaataatctggccgtcttccccgagctgcttttcctgggaacaacaaagctttac
agacttgatatcagcgagaatcagattcagggggttccaagaaaagccttcaggggagct
gtggaaatcaagaacctccagttggactacaaccacatcagctgtattgaagatggagct
tttcgagcgttacgtgacctggaagtgctcaccctcaacaacaacaacatcagccgactg
tctgtagccagtttcaaccacatgccgaagctcaggacatttcgcctgcactccaacaac
ctgcagtgtgactgccacgtggcctggctgtcagagtggctgcgacagcgcccccgtctg
ggtctttacacgcaatgcatggctccgccgcacttgagggggcacaacgtggctgaggtg
cagaagaaggagtttgcctgcacaggtcaccagtcgtcatcatcttcctcctgcagtgtg
ttacagtgcccagagtcctgcacctgcagtaacaacatcgtggactgcagaggaaaggga
ctgactgaaatacccaccaacctacctgaaaccatcactgagatacgactggagcagaac
gccatcaaggtgatcccagctggagccttttctccttataagaagctgcgcaggatagac
ttgagtaacaaccagatatcagagttagcctcggacgccttccaaggcctgcgctctctc
aactctctggtgctatatgggaacaagatcactgagatttctaaagcactgtttgaggga
ctgttttctctgcagctattgttactgaatgctaataagatagcgtgtctgcgtgtggac
gcatttcaggacctccacaacctcaatctgctttcactatatgacaacaagctccagacc
atcgccaaggggaccttctcgtcgctaagagccatacaaacgcttcacttagcccaaaac
ccatttatctgtgactgccatctgaagtggctggcagattacctgcaggacaatcccatt
gagacaagcggtgcccgctgcacaagcccccggcgcctcgccaacaaacgaatcggacaa
atcaagagcaagaagttccgctgctcaggtactgaggattaccgcagtaagctgggagga
gactgcttcgcagacttggcctgccctgagaagtgccgttgtgagggcaccacagtcgac
tgctccaaccaaaaacttaccaaaataccagatcacatccctcagtacaccgccgaactg
cgtctgaacaacaatgaattcactgtgcttgaggcgacagggatcttcaaaaagttgcct
cagctgaggaagattaacctgagcaataaccgtatcactgacatagaggaggggacattt
gaaggagcctcaggggtcaatgagttgattctgacctccaacagactggagaacatacac
caccgcatgctgaagggactcagtggcctccgcacacttatgctgaggagtaaccgtatc
agctgtgtgagtaacagcagcttcgtggggttgagctcagtccgtctcctgtcgctctat
gacaaccagatcacctcaatgaaccccggagccttcgacacactgcactccctgtccaca
ctcaaccttctggccaatcccttcaactgtaactgtcacctggcttggctcggtgattgg
ctgagaaggaaacacatcgtcactggtaaccctcgctgccagagtccttatttcttgaag
gagatccccatccaggatgtagctgtccaggactttgcctgtgaagatggtaacgatgag
aacagctgctctccagtgctgaggtgtccagcagagtgttcctgtctggacactgtggtg
cgctgcagcaacaagggcctcaccacactgcccaaaggcctgcccaaagagaccactgaa
ctatatttggatggtaaccacttcactcaggttcctgtggagctctccaattacaaacac
ttaacactcattgatttgagtaacaaccagatcagcacgttgtccaaccacagcctcagt
aacatgtccgagctgcttaccctaatcctgagctacaaccgtctgcggtgcataccagtg
agggcgttcgatggactcaagtctctccgtttgctgtctctccatggtaacgacatatca
ctaataccagagggagccttcaaagacctgtcatcgctctcccacctggctctgggtgcc
aaccctctgtactgtgactgccacatgcagtggttatcagactgggtgaagagcggctac
aaggagcctggcatcgcccgctgtgccgggcccggtgacatgacggacaaactgctgctc
accacgccttccaagaagtttacctgcacaggtccagttgatatgaatgtccaggctaag
tgtgagccctgtctatccaacccctgcaagaacgatggcacctgctctaatgacccagtg
cactactaccgctgtacctgcccctatggatttaagggacagaactgtgaggagcccatt
catgcctgtatcagtaacccgtgccagaatggcggcacttgccacctaaaggaaggagaa
gggagcaacttttggtgtgtgtgtccagagggctttgaaggcgacggatgtgagatcaac
atcgatgactgcgaggacaacgactgtgagaacaactccacctgcgtcgatggaattaac
aactacacatgcatgtgctcactagaatacacaggggagttatgtgaagagaaactagat
ttctgtgctccagagctgaacccatgtcagcacgactcaaagtgcattttgacccctcag
ggttacaagtgtgagtgcactccaggctatgtaggtgagcactgtgagctggattatgac
gactgtgaagagaacaagtgtcagaacggaggtcagtgcattgacgcagtcaatggatac
acctgcgtctgtcctgagggatacagtgggttattctgtgagttctctcccccgatggtc
cttcctcgcaccagcccctgtgacaaccacgagtgcctcaatggggcacagtgtgttgtc
atgggatcggacccccgctgccagtgtctccatggctacaagggtgatcgctgtgagaca
ctggtcagtgtcaactttgttaaccgtgagtcctacctgcaacttccatccagtctcctc
tcaccggacaccaacatcagtctacagattgctacagatgaggacagtggcgtgttgttg
tataaaggggacaatgatcacatcgccatggagctgtacaggggacgcctcagggtcagc
tacgatactggatcttaccctccttcagctatatacagtgtggagacagtgaatgatggt
agcttccatgctgtggagttggtagcatcagaccagactttgtctctgtccatcgacggc
gggccgcccaaatccattaactccatcagcaaacagtccacactcaacatagattctccg
ctttacctgggaggtatgccagaacgcgcctcagcctccgggggtctctcgtccatgcag
catagctcaggcggacgcaacggcaccagcttccacggctgcctccgtaacctgtacatc
aatgggaagctgcaggacctgggggtcgggctggggacagggactccaggctccgggact
gcacacagcaccaccagacagtggctgggccacggggtggagccaggctgccagccctgc
cagaggggagcctgtgtccagggtgactgccacccaacagggcatcgtggcttcacttgc
acctgccacccaggctggacgggaacagtgtgtgaccagcaagttaacaatccctgtgat
ggcaacaagtgtatccatggtacctgccttccaatcaactcctactcctactcctgtcgc
tgccagcctggttttgctggtgtactctgtgatgagcaagaccaggatacagctaacccc
tgcagtctgtctcactgtaaacatggcaaatgtagagtgtctggcctgggcaaggcatac
tgcgagtgtaacagtggatatacaggagaggcgtgtgacagagaggtggcctgccgaggg
gaacgggtccgagatgtctaccagagacagcaaggctacgcggcgtgccaaacccaggag
aaggtctcccgcctagagtgtcggggcagctgcccggggggagcagaaggacagggcccc
tgctgcacccccctccgcagcaaacgcaggaaatacaccttccagtgcactgatggctct
tcttttgtccaggaagtggagaaagtggtcaagtgtggctgtacacagtgttcctcataa
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integrated database retrieval system