Sander vitreus (walleye): 144526653
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Entry
144526653 CDS
T11640
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
svit Sander vitreus (walleye)
Pathway
svit03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
144526653 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svit03019
]
144526653 (ndc1)
Messenger RNA biogenesis [BR:
svit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
144526653 (ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
144526653
NCBI-ProteinID:
XP_078120387
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All DBs
Position
12:18175851..18184899
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AA seq
669 aa
AA seq
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MLSAEQSCWFVRKVIFWRAVASIAWAVLLLPPITAVFVIISRFSLLHPIQAVSECLSFLT
SASAIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQFVNSLAHCIMGI
IVAWCCAITVGGRYETIADPCAQGDGSPQMCLNEYHLILLLAGAFVGFSHSLLGVIYNMN
YVSFHTVQQYKYLRFKGSLSLVLKCSATQALYSVRNYIVMYFFLGYIPKAWICKTLNLHL
NSAVHPLDSIAGLLDLSLLYHLWISASFLLFTWHITLLLFRVFVTEVYSFPVQSSFTENA
HQCLPTVLTDKQPMILKFLALQDLALLSQHSPSRRSEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLIVYHDTVATNGRAKSLSTGSERKTSSESSVTSGTQDLMSPRPTLLMKTPAS
VFARSIVGCPQSPLTAPFTPDLDSPFASPALRRLTAPTDQCSPWFGTVQSPHIMRRVPKL
WSTSTDSQVNGSPLASPASVPSPKQEPSKPSLLAQFLQNRKEQVKNVLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQSSFSEDQFGVVQTALPSILSCMLGLQEAVDRH
FKLPHASSKPVRSASSMGDSTHKTLRFALRATLKTSIYRITTTFGNHLNAVKMSAEHRKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcagagcaaagttgttggttcgtccgcaaggtgatattctggagagctgtg
gccagtattgcttgggctgtcctgttgttgccacccatcacagccgtttttgtaatcatc
agcaggttcagtctgctccaccccatccaggcggtatcagaatgcctgtccttcttaacg
agtgcaagtgccatcttctccttcattctgctgtgtggagtgatcatcatggtagggttc
ctgaacctggagtattatacagtcatcccaaccattgcatgctcaaaaattgccctgttg
ggtcagctactccaccctcgtcagtttgtcaactccctggcccactgtatcatgggaata
atcgtggcttggtgttgtgccatcaccgtcgggggcagatatgagacaatcgccgaccct
tgcgcacagggtgatggttcccctcagatgtgcctgaatgagtatcacctcatccttctg
ctggctggagcctttgttggattctctcacagtctgctgggtgtgatctacaacatgaac
tatgtttcttttcacactgttcagcaatataaataccttcgctttaagggatccctatct
ttggtgctgaagtgtagcgccactcaagcactttactctgtcaggaactacattgttatg
tatttctttttgggatacattccaaaagcatggatttgtaagacactgaatcttcatttg
aacagcgctgtccaccctcttgacagcatagctggactgctggacctgtccctgctctac
cacctgtggatcagcgccagcttcctcctcttcacatggcacatcacactgctgctcttt
agggtctttgtcactgaggtgtacagttttcctgtgcagtcatcgtttactgagaatgcc
caccagtgtcttcctacagttctgactgacaagcagccaatgatattaaagtttctagct
ctgcaggacttggctctgctgtctcagcactccccatcgagacgcagtgaggtcttcagt
ctgagtcagccaggtggccatccccataactggaacgccatcagtaaggagtgtctgtct
ctgctggctgatctgactcagagactcatagtctatcatgacactgtagcaaccaatggc
agggccaaatcactgtccactgggagtgagaggaagacttcatctgagtcatcagttacc
tcgggtacacaagatcttatgagcccgaggcctactttactgatgaaaactccagcttcg
gtctttgcacgctccattgttggctgcccacagagccctctgacagcaccattcactcct
gacctggacagcccctttgcttctcccgccctgcgtcgtcttactgctcctacggaccag
tgctcgccgtggttcggcacagtgcagagcccacacatcatgaggagagtcccaaaactc
tggtccacctccacagattcacaggtcaatggcagtcccctggcttcccctgcctcagtt
cccagtcccaagcaggaaccgtccaaaccaagtctcctggctcagttcctccagaacaga
aaagaacaggttaaaaatgtcttggcaaagcgcgtgctgataatgtatttgtttaacaag
cttccagaggcctccagtcaagctctgtttgcagacagccaggctcacatctgggcttta
gaagggctgtcttaccttgttcaatcctccttctcagaagaccagtttggggttgtacag
acagcattacccagcattctcagttgcatgctgggtttacaagaggcagtagatcgtcac
ttcaagctgcctcatgcctccagtaagccggtcaggtcggccagcagcatgggagactct
actcacaaaacgctgcgctttgctctcagggccactctcaagacttccatctacaggata
acaactacttttggaaatcacttaaatgctgttaagatgtctgcagagcaccggaaaaga
ttgcagcagtttctggagtacaaggaataa
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