Sander vitreus (walleye): 144527309
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Entry
144527309 CDS
T11640
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
svit Sander vitreus (walleye)
Pathway
svit03013
Nucleocytoplasmic transport
svit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144527309 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
144527309 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svit03019
]
144527309 (thoc2)
03041 Spliceosome [BR:
svit03041
]
144527309 (thoc2)
Messenger RNA biogenesis [BR:
svit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
144527309 (thoc2)
Spliceosome [BR:
svit03041
]
Complex C
Other components
EJC/TREX
144527309 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
144527309 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
144527309
NCBI-ProteinID:
XP_078121344
LinkDB
All DBs
Position
13:complement(19080024..19107754)
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGRDIRDIQAALYELCWQVVHGNLKL
ELVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKREHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDATIIEEHKRDISE
AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWHNALSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVMHPLRSKRAPRPAESFE
DLRRDTFSMICYLGPHLSHDPILFAKIVRLGKSFMKEYQSDGRPDVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLLQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKTEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL
KVQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLSCMLETVTRWHSDRATYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKGQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPATSTSKTEEGMSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAIK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERVAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRGAVAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHANYNSVSRSKSREREMEKKDSDN
TQGRSKEKKEDKDRKDKKRDHAVNDRETSQESKRKKDENGTNSTKNSKSASPSCESPLSA
EKEKSKRSKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEDKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatctggaaaacac
gagtttgtacaactctgcaaagaacttacagaaaaaacagatcatggacgtgacattaga
gacatacaggccgccttatatgagctctgctggcaagttgtacatgggaacctgaagtta
gagcttgtcgccagcgtccttggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgttttcagtatactagatttagagactggtgcactggaagaaaaaaacaaa
cgtgaacattacacacaactggtgggagcatgtttgttttttgttcctgaggccatcttg
aaagagaggctggatccagaaacccttgaatctcttggacttataaaacaagcccatcag
ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcagcagaagtttaac
ttgctaagggaggagaatgagggctatgccaaacttatcactgagcttggccaagacctc
tcaggcaacatcaccagccaccttgtcctggagagcatcaagtccctcataggatgtttc
aacttggaccctaatcgtgttttggacatcatcctggaggtgtacgagagtcgatctgac
caagacgagttcttcctgtctctcatcaagtcctacatgtgtgagccactcaccctttgc
cacatcctgggctttaagttcaaattctaccaggagcccaatgaggaaacccccaagtca
ctttaccacattgctgctgctctgcttcaccataacctgatagagctggaagatctctac
gtacatcttatgccagtagatgccaccattatagaggaacacaaacgagatatctcagag
gccaagcagattgctcgcaagctggtcatggttgtgttgccctcagagaaaagtgaagac
aaagacaaggagaaagaaaaggaggaggagaagaatgagaagccgcctgataaccagaag
cttggactgttggaagcgctgcttagaattggagactggcacaacgccctaagtattatg
gaccagatgccgtccttctatgctacttctcacaaggccattgcgctggcactctgccag
cttgtgcacctgactgtggaacctctttacagaagggctggcctcccgaaaggggcaagg
ggatgtgtgatgcatccactgaggagcaagcgagcccctcggcctgcagagagcttcgag
gacctacgcagggacacattcagcatgatctgctacctaggtcctcacctctctcatgac
cctatcctcttcgccaagattgtgcgtctgggcaagtccttcatgaaagagtaccaaagt
gatggcagacctgatgtcaaagacaaaatggaaacattattgagttgtttcctgagcatt
gcagatcaggtgctactcccttctctttctctgatggagtgtaatgcttgcatgtctgag
gaactgtggggtctctttaaactctttccctaccagcacaggtaccggttatatggacag
tggaagaatgagacgtataccagccatccactgttggttaaagtcaaagctcagactgtg
gaaagggccaaatacataatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggaaaactgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccaatggtatgacaacctaatcgttccagtggtggactccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcatcattgaggctctggcaaatcccgagaaggag
aagatgaaacacgatgacaccaccatttcctcatggcttcagagcctggcaagcctgtgt
ggagccgtgttcagaaaatacccaattgagttggctggccttcttcaatatgtcactaat
cagctaaaagcaggaaagagttttgacctgttgatcctgaaagaggtggtgcagaaaatg
gctggcattgagatcacagatgagatgacctcagagcagttagaggccatgaccggaggg
gagcaactcaaagctgagggtggctacttcggccagatcaggaacactaagaagtcatca
cagcgtctgaaggatgcactgctggaccatgaattggccttgcctctgtgtttactcatg
gcccagcaacgaaatggtgtggttttcttagagggtggagagaaacaccttaaacttgtt
ggccacctctatgaccagtgtcatgacacgttgttgcagtttggtggctttctggcctcc
aaccttagcactgaggactacatcaagcgggttccctccattgacatcctttgtaaccag
tttcacactccacatgatgctgccttcttcctgtctcggccaatgtatgcccatcagatt
ttgtctaagtacgatgagctgaagaaaactgagaaaggcaaccggcagcagcagaaggta
cacaagtatgtggcagcctgtgaacaggtgatgacaccagtgcatgaggctgtagtatcc
ctccatccagccagggtctgggacgatctccgccctcagttctacgccaccttctggtcc
ctcaccatgtatgacctggccgttccacattctgcctacgagcgtgaggtcaacaagctc
aaggtccagatcaaggccattgaggagaacccggagatacccttgaataagaaaaagaag
gaaaaggaacgctgcactgccctgcaagaaaaactgcaggaggaggagaagaaacagctg
gagcacgtccaaagggttttacaccgtctcaaacttgagaaagacaactggttgttggca
aaatccacaaagaacgaaacaataacaaagttcctgcagctctgtctgttccctcgctgc
atcttctcttccatcgacgctgtgtattgtgcccgttttgtcgagctggtccaccagcag
aagacacccaacttctgcaccctcctgtgctatgacagggtgttctccgccatcatttac
actgtggccagctgtacggagaatgagtctcaccgctacggacgcttcctctcctgcatg
ctagagacagtgacccgttggcacagcgaccgcgcaacctatgagaaggagtgcgtcaat
tacccaggattcctgaccatcttcagagccacaggcttcgatggcgggaacaaagcagat
caactggattatgagaacttcaggcatgtggtgcacaaatggcactacatgctgaccaaa
gcttcggttcactgcctggagacaggagattacacccacatccggaatattctcatagtg
ctcaccaagatcctgccctgctaccctaaggtcctaaacctgggccaagcgctggagtgc
cgtgtccacaagatctgcctcgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcgtttgaaaggccagaaggtgcatatggtccccgagaatgagttt
caccacaaagagcagccagcacgcagtgccacccctgccaatcaacagaacggcccaggc
agcacaggcaagcctgccaccagcacaagcaaaacagaggaggggatgtcagaggatggt
gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaatgggaacggtgctcttaacagcaccaaagccattaaa
gaacgagacgacaaagagaaaagtgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagcactcctgagaccaaggcggagaaccgtcgggagaagcagagagacgagagagca
gggaaggaggagcgggtggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggctgaggagaagagcagcaaagacgacaaggccaaagccggcaacggggag
cccatggagccgtccagggagcgcgatgccatcaaggagtccaagagcaaggagaaagga
gacagaggtgctgtggccgggtccctcaagtcaccagttccaagatcggagtcagccgaa
tcggagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgccaactac
aattcagtttcccggtccaagagcagagagagagagatggagaagaaagattcagacaac
acacaaggccgatccaaagagaagaaggaagacaaggatcggaaagacaagaaaagagac
catgctgtcaatgaccgtgagacgagccaagagtccaaacgtaaaaaggatgagaatgga
acgaattccaccaaaaacagcaagagtgcgagtccttcctgtgagtccccgctttcagct
gaaaaggagaagagtaaaagatccaaatcttccagtaaagagaaggctgagtctgtgaaa
cctgagcgaacatcctctggaggcaaaaaggagtccagacacgacaaagagaaatctgaa
aagaaagagaagagggatagcagcggaggaaaggaagacaaaaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system
