Sander vitreus (walleye): 144527350
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Entry
144527350 CDS
T11640
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
svit Sander vitreus (walleye)
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svit03021
]
144527350 (supt6h)
03036 Chromosome and associated proteins [BR:
svit03036
]
144527350 (supt6h)
Transcription machinery [BR:
svit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
144527350 (supt6h)
Chromosome and associated proteins [BR:
svit03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
144527350 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
144527350
NCBI-ProteinID:
XP_078121417
LinkDB
All DBs
Position
13:13225383..13243392
Genome browser
AA seq
1750 aa
AA seq
DB search
MADFIESEAEESEEEFEEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGDEE
GEEEEGPAGSASGAGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDR
VKTLDDDEEDDDEKDLIADEIFHGDAEGELEEGEAVDEPLHHADDDEEGEDEESDIDDFI
VDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADTYDQGEEEEEDQDEEGW
DRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDE
LEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEV
PFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQYEQISADPD
KPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKASKKRLKKIK
EVSEDGEEEELEVEEEEEPKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLR
DSYQRHETEQFPAEPVELAKDYVCSQFSTPETVLEGTRYMVAMQIAREPLVRHVLRQTFQ
ERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGEQFLKMCLAEDEGLLSIDICI
DLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKELKS
KLITEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRD
TPVFCALINGEGEVVDFLRLPYFMKRRNAFKEDEREKKAHDIENLKRFLSGKKPHVVAVA
GENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEVDFRDYPPLLR
QAVSIARKIQDPLMEYAQVCSSDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEVGV
DVNKAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINC
AGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEE
ILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVIYRVPNTEEVFN
LLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELSE
VWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKID
IEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIKRVIA
HPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA
FSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNWGSKEKMEELLVKTK
REKPTFIPYFISACKDLPGKFILGYQPRGKPRVEFVTITPDGFRYRSQIFPTVNGLFRWF
KDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAVT
GQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPSQ
QALGTPQYPGSTPQSSHSHATHGHPHGSHVSHHSHHGHHSSHQGHSSGTPSSSTSSRGRT
PQQQPPKASGSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAGD
ATPLLDEMDR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttattgagagcgaggctgaggagtcagaagaggagtttgaagagaaagac
ctaaagcctaaaaagacccagaggtttttggaggaagatgatgaagaggaagaagagaac
acagaggaccaggatgaacgaggaaatttacgaggacttattgatgatggagacgaggag
ggggaggaggaagaaggacccgcaggaagtgcaagtggagcagggagtgactcagaagag
gaagtgaggcatcgacgtaaaaagcgcaattatgacgactacctggatgacgatgatctg
gacctaattgaggaaaacttgggtgttaaagtgaagaggaggaagaagaaatatgaccgt
gtaaaaacactcgatgatgatgaagaagatgacgacgagaaggacttgatcgcagatgag
atctttcatggtgatgcagagggcgagctggaggaaggcgaggctgtagatgagcctctt
caccatgcagatgacgatgaagaaggagaggatgaggagtcagatatagacgatttcatt
gtggatgatgacggccaacctataaccaaaaagaggggcaagaagttctcaggatacaca
gatgcagccctccaggaggcccaagaaatctttggtggagactttgactttgctgacttt
gacgcagacacatacgaccagggtgaggaggaggaagaggaccaggatgaagagggttgg
gaccgacctaagaagcagaccaagaggaggcaggggaggaagagcatctttgaaatctac
gagcccagcgagctggagagtagtcacatgactgaccaagacaatgaaatccgctctacg
gacatgcccgagaggttccagttacgatctattcctgttaaacctgctgaggatgatgag
ctggaagaggaagcagagtggatcttcagacatggcttctctactcttactatctctatg
caggagagcacagattatctagacagggggaccaccacaaacttcagcaggaaaggcccc
agtacaattgccaagatcaaagaggccctcaacttcatgaggaatcaacaatttgaggtt
ccattcatagctttctacagaaaagaatatgtggagccagaactaaacatcaatgaccta
tggaaggtgtggcagtgggatgaaaagtggactcaactgaagactcggaagcagaacctg
acccgtctgtttcggaagatgcagtcctaccagtatgagcagatctcagctgaccctgac
aaacctttggctgacggcatccgtcctctggacaccgctgacatggagaggctgaaagat
gtgcagactcttgaagagctgggtgatgtgtacaaccactttctgctctactatggccga
gacatccccaagatgcagaatgctgccaaggccagtaagaagaggcttaagaagatcaaa
gaagtgtcagaggatggtgaagaagaggaattggaggtagaagaagaagaagaaccgaaa
ggacctgacctcaagctggcgtctcgtagagatatgtacagcatctgtcagagcgtagga
cttgatggcttggctaaaaagtttgggttaactccagagcagtttggagaaaatttgaga
gacagttaccagcgtcatgagacagagcagttcccggctgagcccgtagagctggccaaa
gattatgtttgcagccagttcagcactcctgagacagtgctagaaggaaccaggtacatg
gtggccatgcagattgctcgtgaacctctggtcagacatgttctccgacagacctttcag
gagagggccaagatcaatatcaagcctacaaagaagggcaaaaaggaggtagacgaggct
cattttgcctactccttcaagtatcttaagaacaagcctgtaaaagagctgaatggggaa
cagttcttgaagatgtgcctggcagaggacgaggggctgctttccattgacatctgtata
gaccttataggggtcaaagggtatgcgggggaccagacatactttgatgagatcaaacag
ttctactacagggatgagttcagtcaccaggtgcaggagtggaacaggcagcgaacctta
gccatagagagagcgctcactcagttcctctaccctcagatggcgaaggaactcaagagc
aaactcatcactgaggccaaagagagcattgtcaggtcctgctgtcgtcggttgtataac
tggctcaaggtggctccttaccgaccagatcagcaggttgaggaagacgatgatctgatg
gatgagagtcagggcaaaggcattcgggtgctaggtgtagcctatgcgcccagcagagac
acgccagttttctgtgctctgatcaacggggaaggggaggtggttgactttttgcgtctg
ccctatttcatgaagaggaggaatgcctttaaggaggacgagagagagaagaaggcccac
gacattgaaaatctcaagaggtttctgtctggtaagaaacctcatgtggtagctgtcgct
ggggaaaaccgagatgctcaaatgatcatggaggacatcaagaggactatcagcgagctt
gagcaagagtcctctctgcctgctgtgggagttgaactcgttgacaatgaattggccaca
ctatacatgaacagcaagaagtctgaggttgattttagggattaccctcccttgctgcga
caggctgtgtcaatagccaggaagatccaggatccgctgatggagtatgctcaagtttgc
agcagtgatgatgatattctctgcctcaaactacacccgctacaggaacatgtggtgaag
gaagatttgctctgtgctctttactgcgaattcatcaaccgtgtcaatgaggttggagtt
gatgtgaacaaggccattgcccatcctcacactcagagcctggtccagtatgtctgtggc
ctgggaccaagaaagggctcccacctgctcaagattctgaagcagaacaacactcgtctg
gaaaacagaacccaactggtcacgatgtgtcacatgggacccaaggtttttatcaactgt
gccggtttcatcaagattgacacggcatcgctcggggacagtacggactcctacatcgag
gttctggacggctctcgtgtccaccctgagacgtacgagtgggctcgcaagatggctgtg
gacgccctcgagtatgatgagtcggcagaagatgccaacccagctggagcactggaggag
atcttggaaaatccagaacgtctcaaagatcttgacctggatgcctttgctgaagagctt
gagagacagggttatggcaacaaggggattactctgtatgatatccgtgcagagctgagc
tgcaggtacaaagatctgagagttatctacagagtccccaacactgaggaggtcttcaac
ctgctcaccaaggagactccagagaccttttatattggtaagctgatcaccagtatagta
actggtattgctcaccggcggcctcagggagagagctacgaccaggccatccgtaacgat
tctacagggctgtggcagtgtcccttctgccagcaggataacttccctgaactcagcgag
gtgtggaatcactttgacagtggttcgtgtccaggtcaggccattggggtgcggtccaga
ttagataatggcgtacagggattcattcccaccaagtttctcagtgacaaagtggttaaa
caccctgaggagagggtcaaggtgggcatgacagttcactgccgcatcatgaaaatcgac
attgagaaattcagtgtcgacctcacatgccgaacctcagatttgatggacaaggccaat
gagtggaagcttcccaaggacagctactatgactttgatacagagtccgaagaccaaaaa
caggaggaggagctcaaaaagaaacaacagcgaacaccatatataaagcgtgtgatcgcc
caccccaacttccacaatatcagtttcaaccaggcagagaaaatgatggagaccctggac
cagggagacttgatcatcagacccagcagcaagggagagaaccacctcacagtcacctgg
aaggtggctgatggcatctaccagcatgtggatgtgagagaagaaggcaaagaaaatgca
ttcagcttagggcacacactctggatcaataatgaagagtttgaagatctggatgaaatc
actgctcggtacattcagccaatggcgtcatttgcccgggatctactggggcataagtac
ttccaggagtgcaactgggggagcaaggagaaaatggaggagttattggtcaagacaaag
agggagaagcctacttttattccttactttatttcggcatgtaaagatctgccaggaaaa
ttcattctgggctaccagcctcgcggaaaaccacgggttgagtttgtgaccatcacccca
gatggtttccgctaccgttcacagatatttcctaccgtgaatggactattccgctggttt
aaggaccattaccaagagcctgtgccaggcatcactcccagcaacagcagccgaacaagg
acacctgcatccctcaacgccaccccagccaatatcaacatcgcagacttgacacgagct
gtcaacgccctcccacgcaacatgacctctcagatgttcaatgccatcgccgcagtcaca
ggccagggccagaaccccaacaccacccccgcccagtggggctccagccagtacggctac
ggtggcagcacaggaggaggaggagggagctcctctgcttatcatgtatttgcaacacct
cagcagcccatggcgacgcccatgatgacgcccagctactcctacaccacaccgagccag
caggccctgggcacgccacagtaccccggctccaccccgcagtcctcccactctcacgcc
acacatggccacccacatggaagccatgtgtcacaccacagccatcacggccatcacagt
agtcaccaaggccactcatccggcacgccgtcatcctccacctcatccagaggacggact
ccacagcagcagccgccaaaggccagcggcagcaacgcctctgcagtggactggggcaag
atggcggaacagtggctgaaggagaaagaagcggaggggcggaagaaagcccagaggatg
acgccgcgaccgtcgcccagccccatgatcgagagcacacccatgtcaatcgccggagac
gccacgcccctgctggacgaaatggaccgatag
DBGET
integrated database retrieval system
