Sander vitreus (walleye): 144529340
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Entry
144529340 CDS
T11640
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
svit
Sander vitreus (walleye)
Pathway
svit04080
Neuroactive ligand-receptor interaction
svit04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
144529340 (thrb)
04081 Hormone signaling
144529340 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svit03000
]
144529340 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
svit03310
]
144529340 (thrb)
Transcription factors [BR:
svit03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
144529340 (thrb)
Nuclear receptors [BR:
svit03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
144529340 (thrb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PAP_central
Motif
Other DBs
NCBI-GeneID:
144529340
NCBI-ProteinID:
XP_078124482
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All DBs
Position
14:28025127..28187848
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AA seq
415 aa
AA seq
DB search
MSEPAENCSPRWKDEAIQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQKTVWDRQEPTQEEWELIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKETKPEENGQASMVNTPEGNKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTREQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQVVILLSSDRPGLSSVERIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaattgctccccccgctggaaagatgaggccattcaaaatggg
tacattccaagttacctggacaaggatgagctatgtgtagtgtgcggggacaaagccaca
ggctatcactatcgctgcattacctgtgaaggttgcaagggtttcttcaggcggacgatt
cagaagaatctcaacccaacctacgcttgtaagtacgaggggaaatgtgtcatcgataaa
gtgaccagaaaccagtgccaggaatgccgcttcaagaagtgcattgcggtgggcatggcg
accgacttggtgctggatgacagcaagaggctggccaagcggaagctaatcgaggagaac
cgggagcgccgtaggaaggaggagctgcagaagacggtgtgggaccgacaggagcctacc
caggaagagtgggagctgatccgtatggtgacggaggcccacatggccaccaacgcgcag
ggcaaccactggaagcagaagcggaaattcctggtcgaggaagctatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcgggggtgaaggaaactaag
cctgaggagaatggtcaagcgtccatggtcaatacacccgaaggaaacaaagtggatata
gaagccttcagtcagtttacaaaaattatcacccctgccataacccgagtggtggacttt
gccaaaaaactgcctatgttttgtgagctgccttgtgaagaccagatcatcctgttgaaa
ggctgctgcatggagatcatgtcgctgcgagccgcagtccgctacgacccggagagtgag
acgctcacgctcaacggcgagatggcggtcacacgggagcagctgaagaacggaggcctg
ggcgtggtctcggacgccatctttgacctgggcgtgtcgctgtcctcctttaacctggat
gactctgaggtggctctcctacaggtcgtcatcctgctttcatccgatcggccgggcctg
agtagcgtggagcgaattgagcgctgccaggaggagtttctgctggcctttgaacattac
atcaactaccgcaaacacaaagtggcgcatttctggcccaagctgctaatgaaggtgacg
gacctgcggatgatcggcgcctgccacgccagccgattccttcacatgaaagtggagtgt
cccaccgagctattccctcctctcttcctggaggtcttcgaggactga
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