Sander vitreus (walleye): 144530344
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Entry
144530344 CDS
T11640
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B isoform X1
KO
K16360
netrin-G3 ligand
Organism
svit Sander vitreus (walleye)
Pathway
svit04514
Cell adhesion molecule (CAM) interaction
svit04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
144530344 (lrrc4ba)
04517 IgSF CAM signaling
144530344 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
svit04515
]
144530344 (lrrc4ba)
Cell adhesion molecules [BR:
svit04515
]
Immunoglobulin superfamily
NGL family
144530344 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
144530344
NCBI-ProteinID:
XP_078125994
LinkDB
All DBs
Position
15:complement(10382992..10387735)
Genome browser
AA seq
732 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADSSVNYTYFTTVTVETVETPGDKESALVAINETFIRLYPGP
TPSGHLWPEGVPTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGGSGIGAGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTGVGLNNNN
NPSSCSQSQNTSIACSQVTTSGGMPTGGTLPSPVPLPQLGLHSSLKGLMGKSQNEPLLFK
SGSKENVQETQI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcttcttcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaacctg
gaggaggttcccgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcc
atacaggttatcaagtccgacactttcaagcacttgagacaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acattggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctacgggagctgtggctgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgacgcagcctttgtgggcctcatcaatctacgctacttgaacctgggcatgtgt
gggctgaaggacattcccaaactgacagcgcttgtgcgtttggaggagctggagctgtca
ggaaaccgactggagatcatccgacctgggtccttccagggcctggtgtccctacgcaag
ctgtggctaatgcactcacaggtgtccgtcattgagcgcaacgccttcgatgacctgaaa
agcctggaagagctcaacctgtcccataactccctgcactccttgccccatgacctcttc
acgcctcttcaccagctggagagggtacacctcaaccacaacccctggatctgcaactgt
gatgtgctttggctaagttggtggttgaaagagacggtgcccagcaacaccacctgctgt
gcccgctgccacgctcccccagtcttaaagggcaagtacattggagagcttgaccagagt
cacttcacctgcttcgcgccggtcattgtggaaccacctacagacctcaatgtcaccgag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
accccgaatggcacactaatgacgcatggctcctaccgggtgcggatatccgtcctgcat
gatggcacactcaacttcacgaatgtcaccctgcgtgatacgggccagtacacctgcatg
gttaccaatgctgctggcaataccacagcaactgctgtcctcaatgtcaccgctgctgat
tccagtgtcaactacacctactttacaacagtcacagtggaaacagtcgagaccccggga
gataaagagtctgcattggtagccatcaatgagacattcatacgtctttaccctggcccc
actccctcgggccacctgtggccagaaggtgttcctaccactgcctcctctctgtcagca
ggctggtcctcctcctctcctcgggccacccgacccacgttcactgtgcccatcactgag
ccaggcttctcaggcttggatgatgtgatgaagaccaccaagatcatcattggctgcttc
gtagccattaccttcatggcagcggtgatgcttgtggtgttctacaagctgaggaaacag
caccagctgcataaacaccatggccctgctcgtgctattgagatcataaatgtggaggat
gagctgggggctggggccagtggtcggggcagtggcatctcaggaggctccacagtgacg
cagagtggaggcagtggaataggagctggccagagtctcaggctgcaccacccagagata
gtcaacctgccaaacctggcccgatcagagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcctgggcatgggcactggtgtgggcctcaacaacaacaac
aacccctcgtcttgctctcagtctcagaacacatctatagcctgttcccaggtgacaacc
agtggaggaatgcccacaggtggcaccctgccctcccctgtgcccctgccccagttgggt
ctccacagttctctgaaaggccttatggggaaaagccagaatgagcccctgctttttaag
agtggctccaaggaaaatgtgcaagagactcaaatttga
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