Sander vitreus (walleye): 144530924
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Entry
144530924 CDS
T11640
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
svit Sander vitreus (walleye)
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svit03019
]
144530924
03041 Spliceosome [BR:
svit03041
]
144530924
Messenger RNA biogenesis [BR:
svit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
144530924
Spliceosome [BR:
svit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
144530924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
144530924
NCBI-ProteinID:
XP_078126825
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Position
16:6044281..6054580
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AA seq
387 aa
AA seq
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MDDDTPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETSNSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQTMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQLPQQNTVSFAAQP
YSQWGQWYSNTAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGG
MVEPGQGVNGTVLTNQAGMSAAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgacacgcccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gccctcatcttggagttgtttgggcagattggaccgtgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacgagcagtcacttccacgtctttgttgga
gatcttagtcctgaaatcaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcggagaacgccattcagcagatgggaggacagtgg
ctgggaggaaggcagatcaggaccaactgggccacaaggaagcctgctcctaaaactaca
aatgagacatccaattccaagcagctatcttttgatgaggtggtcaaccagtccagcccc
agcaactgcaccgtctactgcgggggagtcacaacaggtctcacagagcaaaccatgaga
cagaccttctcacctttcggccaaataatggaaatccgagttttcccagacaaaggctac
tcatttgtgaggttcaactcccatgaagcagcagctcatgccatcgtgtccgtcaatggc
acatccatagagggctatgttgtgaagtgttactggggcaaagaaacgacagacatggtc
agccccatacagcaggtacagctgccacagcagaacacggtgagcttcgcagcgcagccc
tacagtcagtggggtcagtggtacagcaacacagctgcacagcagattggtcagtatgtt
cccaatggatggcaggtgccgagctatggagtctacggacagacctgggatcagcagggc
tacaatcatttacatgctggtgccggatggacaggtgtgggcgctgtgagcaacgggggc
atggtggagcccgggcagggagtcaacgggacggtgctgaccaaccaggctggcatgagc
gctgctggctaccacacccactga
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