Sander vitreus (walleye): 144531278
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Entry
144531278 CDS
T11640
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
svit Sander vitreus (walleye)
Pathway
svit04517
IgSF CAM signaling
svit04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
144531278
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
144531278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
svit04812
]
144531278
Cytoskeleton proteins [BR:
svit04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
144531278
Intermediate filaments
Intermediate filament-binding proteins
144531278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
PMC2NT
DUF7854
Motif
Other DBs
NCBI-GeneID:
144531278
NCBI-ProteinID:
XP_078127459
LinkDB
All DBs
Position
2:complement(286303..340105)
Genome browser
AA seq
2350 aa
AA seq
DB search
MMTTVAADLEHLELQQQYSSNDTVNNRWDEDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAL
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLLGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVSVARELEAEHYHDIKRVTARKDNVIRLWEYLLELLKARRLRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNATKYSVNS
DGYKPCDPQVIQDRVSHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSFEHGKDLTGAMRLLSQQRALEDEMSGRAGHLKHTIAEGQAMVQAGHFAAIKIQER
IADLQAQWAALEQLAAARKRRLEEALALHQFQADADDVDAWTLDALRIVSTGETGHDEFS
TQALVRKHKDAAAEVASYRPVIDSLHEQAATLPEEEARSEEVRGRLAGIEERYREVSELT
KLRKQALQDALALYKMFSEANACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLSSALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AQRLAEEHPDQANAITGRLAEITAVWEEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTPAEAEKLVAQHHGIRNEIQNYEEDYQRMRDMGEMVTQGQTDAQHM
FLRQRLQALDTGWNELHKMWENRQNLLTQSTAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
PTLEGAEAAIKKQEDFMTTMDANEDKINGVVEVGRRLASDGNINAERIQERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGMLLVSEKPETEAVVKEKLSALHAMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQLVETKFQQLLEPLRRRKDFLVESREVHQFNRDVEDEI
LWVQERMAVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDILERSQSLVKDESPN
GDVIRRRLADLRELWGQLMEEAERRHGRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSAVTMQKKHQIVEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERQGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDSVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIMDKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRECDVLEAWRSLLEACDGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASQEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPVILQHEESQQQSGVIIQNGLPSDQDSPRDGVDGVDLVNGVGERSSKEPSPGASP
TSGRKSKTSLSSTLPSKNQDSSPSQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQEM
GFYKDGKAAAAGVPYHGEVPIGLKDATCDVASEYKKKKHVFKLRVTDGNEYLFQAKDEDE
MSTWIQAILNASVDSCDAPPGSIPGTPASGRAQTLPAAVTLTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggccgccgacctggagcacctggagctgcagcagcagtacagcagc
aacgacacggtcaacaaccgctgggacgaggactgggacaacgagaacagctcggcccgc
ctctttgaacgctcccgcatcaaggcgctcgcagatgaacgggaggcggtccagaagaag
accttcactaagtgggtcaactctcacctgtcccgggtgtcgtgcaggatctctgacctg
tacctggacctgagggatggacgcatgctcatcaagctgctggaggtcctctctggggag
agactgccgaagccgaccaaaggccggatgcggatccactgcctggagaacgtggacaag
gctctgcagttcctgaaggagcagcgggttcacctggagaacatggggtcacatgacatc
gtggacgggaaccaccgcctgacgctcggcctcatctggaccatcatcctccgcttccag
attcaggatatcagtgtggaaactgaagacaacaaagagaaacgatcggctaaagacgct
ctgctgctctggtgtcagatgaagacggccgggtatcccaacgtgaacatccacaacttc
agcaccagctggagagatggcatggccttcaacgctctcatccacaaacacaggccggat
ctgatcgactttgacaaactgaagaagtccaacgctcatcacaacctgcagaacgccttc
aacctggcggagcagcacctgggcctcaccaagctgctggaccccgaggacatcagcgtg
gaccatcctgatgagaagtcggtcatcacctacgtggtgacgtactaccactacttctcc
aagatgaaggctctgaaggtggaggggaaacgcatcggaaaggtgttggacaacgccctc
gagacggagaagatgatcgagaagtacgagtctctggcctcggacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactctctgctcggcgtccag
cagcagctgcaggccttcaacacctaccggaccgtggagaaaccgccaaagttcacggag
aagggaaacctggaggtccttctgttcaccatccagagtaagatgagagccaacaaccag
aaggtctacatgccccgagaggggaaactcatctcagatatcaacaaggcctgggagcga
ctggagaaagcggagcacgagagggagctggctctgaggacggagctgattcgtcaggag
aaactagaacaactcgccagacgcttcgaccgcaaggcagccatgagagagacctggctc
agcgaaaaccagagactagtgtcacaggacaactttgggttcgatcttcaggccgtggag
gcggccaccaagaagcacgaggcgattgagacggacattgcggcgtacgaggagcgcgtg
caggcggtggtttccgtggcgagggagctggaggcggagcactaccacgacatcaaacgt
gtcacggccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaag
gcgcggcggctgaggctggagatgaacctgggcctgcagagagtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctgctgtctcaggattacgggaag
catctgttgggcgtggaggacctgctgcagaaacacgctctggtggaggccgacatcgcc
atccaggccgacagggtgaaggccgtcagcaccaacgccaccaagtactccgtcaacagc
gacggctacaagccctgtgaccctcaggtgatccaggaccgcgtctcccacctggagttc
tgctaccaggagctgacccagctggccgccgagcgccgcgcccgcctggaggagtcccga
cgcctctggaagttcttctgggagatggcggaggaggagggctggatccgtgagaaggag
cagatcctatcttcctttgagcacggcaaggacctgacgggggcgatgcgcctgctcagc
cagcagcgcgccctggaggacgagatgagcggccgcgccggacatctcaaacacaccatc
gcagagggccaggccatggtgcaggccggacacttcgccgccatcaagatccaggagcgg
atcgctgacctgcaggctcagtgggcggcgctggagcagctggccgcggcgaggaagcgg
cgtctggaggaggcgttggcgctgcaccagttccaggcggatgcggacgacgtggacgcc
tggacgctggacgccctgcgcatcgtctccaccggagagacgggccacgacgagttctcc
acgcaggcgctggtccggaagcacaaggacgcggcggcggaggtggccagctaccggccg
gtcatcgactcactccacgagcaggcggccacgctgcccgaagaggaggcgcggtcggag
gaggtgcgcggccgcctggctggcatcgaggagcgctacagggaggtgtcggagctgacc
aagctgaggaagcaggcgctgcaggacgctctggcgctctacaagatgttcagcgaggcc
aacgcctgcgaggtctggattgacgagaaggagcagtggctcaacagcatggagatcccc
gaaaaactggaggacctggaggtcatacagcaccggtttgagagtctggagccggagatg
aacaaccaggcgtctcgtgttgccgtggtgaaccagatcgccaggcagctgatgcacaac
ggtcatccgagcgaaaaggacatcaagacccagcaggacaaactcaacaacaggtggagc
cagttccgtgacctggtggaccagaagaaggagtccctgagctcggctctcggcgtgcag
aactaccacctggactgcaacgagaccaagtcgtggatcagagagaagaccaaagtcatc
gagtccacgcaggagctgggcaacgacttgaccggcgtcatggcgctgcagaggaagctg
acgggcatggagcgtgacctggccgccatcgaggacaagctgggcgacctgcgcggcgag
gcccagcgcctggcggaggaacaccccgaccaggccaacgccatcacaggccgcctggcg
gagatcacggccgtctgggaggaaatgaagaacactctgaagacccgcgaggagtcgctg
ggcgaggctcggaagctgcagcagttcctgcgcgagctggacgacttccagtcgtggctg
tcgcgcacgcagacggccatcgcctcggaggacatgcccaacacgccggccgaggccgag
aagctggtggcccagcaccacggcatccggaacgagatccagaactacgaggaggactac
cagaggatgcgggacatgggcgagatggtgacgcagggccagacggacgcccagcacatg
ttcctgcgccagaggctgcaggcgctcgacactggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgacacagtccaccgcctaccagctgttcctccgggacacc
aagcaggccgaggccttcctcaacaaccaggagtacgtcctggctcacacggagatgccc
cccaccctggagggggccgaggccgccatcaagaagcaggaggacttcatgaccaccatg
gacgccaacgaggacaagatcaacggcgtggtggaggttggcagacggctggccagcgac
ggaaacatcaacgccgagcgaatacaggagagagtcgcctccatcgacgacagacataag
aagaacagggaggctgctgtggagctgctgatgagactgaaggacaacagagacctgcag
aagttcctgcaggactgccaggagctgtctctgtggatcaacgagaagatgctcacggct
caggacatgacgtacgacgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaagagtggctggacaagatccagaaggacggcatg
ctgctggtgtcggagaagccggagacggaggcagtggtgaaggagaagctgtcggcgctc
cacgccatgtgggaggagctggagtccaccacgcagaccaaagctcagtgtctgttcgac
gccaacaaggccgagctgttcacccagagctgcgcagacctggacaagtggctgggaggc
ctcgagggtcagatccagtccgacgactacgggaaagacctgacctccgtcaacatcctg
ctcaaaaaacaacagatgctggagaagcaggtggaggtgcgtcagcgtgaggtggtggag
ctgcagagccaggtgaaggctctgggtcaggaggtcaaagacacggacgaggtggacggg
cggaggcagctggtggagacaaagttccagcagctgttggagccgctgcgccgtcgcaag
gacttcctggtggagtcgagggaagtccaccagttcaaccgagacgtggaggacgagatc
ctgtgggtccaggagaggatggctgtggccacgtccaccgaccacggacacaacctgcag
acggtccagctgctcatcaagaagaaccagactctgcagaaagagatccagggtcatcag
cctcgcatcgacgacatcctggagcgcagtcagagcctcgtgaaggacgagtcgcccaac
ggtgacgtgatccggaggcgcctggccgacctgcgagagctgtggggccagctgatggag
gaggccgagcgccgccacggccgcctgcaggaggcgcacaaagcgcagcagtactacttt
gacgccgccgaggccgaggcctggatgagcgagcaggaactgtacatgatgtcagaggag
aaggccaaggacgagctgagtgccgtgaccatgcagaagaagcatcagatcgtagagcag
gcggtggaggactacgccgagacggtccaccagctgtccaagaccagcagaggactggtg
gctgacggacacccagagagtgagcgaatcagcatgcggcagtctcaggtggataagctg
tacgccggcctgaaggacctatcagaggagaggcagggcaaactggacgagaggctccgc
ctcttccagctgaacagggaggtggatgacctcgagcagtggatcgctgagcgggaggtc
gtggccgggtcgcacgagctggggcaggactacgaacatgtaactatgttgcaggagcgt
ttccgtgagttcgcccgggacaccgggaatatcggtcaggagcgcgtggacagcgtcaac
cgtctggcggatgagctgatcaactcgggtcatggcgacgcagcaacggtggctgaatgg
aaggacggtctgaacgaagcctgggccgacctgcttgaactgatcgacacccggacgcag
attctcgctgcctccttcgagctccacaagttctaccacgatgccaaggagatcctggga
cgcatcatggacaaacaaaagaaactgcctgaggaagttggccgcgaccagaacacggtg
gagactctgcagaggatgcacaacacctttgaacacgacatccaggccctgggaacacag
gtgaggcagttgcaggaggacgctgtgcgcctgcagtcggcatacgccggagataaagcg
gacgacatccagcggagggagtgtgatgtgctggaggcctggaggagtctgctggaggcg
tgtgacggacgcagggtccgcctcctcgacaccggagacaagttcaggttcttcagcatg
gtccgagacctgatgctgtggatggaagatgtgatccggcttatcgaggcccaggagaat
cccagagacgtgtcgtcagtggagctgctgatgaacaaccaccagggcatcaaggccgag
atcgatgcccgaaacgacagcttcaccgcctgcatcgagctggggaaagccctgctggcc
cgaaaacactacgcttcacaggagattaaagagaagctgctgcagctgacagacaagagg
aaagagatgatcgacaagtgggaggaccggtgggagtggctgcgactcatcctggaggtg
caccagttctcccgggacgccggcgtggctgaggcctggcttctgggtcaggagccgtac
ctgtccagccgggagatgggccagagcgtggacgaggtggagaaactcatcaaacgccac
gaggcctttgagaagtccgctgctacctgggaggagcgcttctccgctctggagaggctg
accacgctggagctgctggaggtgagaaggcagcaggaggaagaggagaggatgaggaag
cctccgtctccggagccggttattcttcagcacgaagagtctcaacagcagagcggagtc
atcattcagaacggactcccgtcagaccaggactctcctcgggacggtgtggacggagta
gatctggtgaacggtgtcggcgagcggagctccaaggagccgagccccggcgcgtccccg
acctccggcaggaagagtaagaccagcctgtcatccacgttgccttccaagaaccaggac
agctcgccgtcgcagctggagggactcctgcaccgcaaacacgagtgggagggacacaac
aagaaggcgtccaacaggtcgtggcacaacgtgtactgcgtcatcaacaaccaggagatg
ggtttctataaagacggcaaggcggctgcggcgggcgtcccgtaccacggcgaggttccc
atcggcctgaaggacgccacgtgtgacgtggcctcagagtacaagaagaagaaacacgtc
ttcaaactccgagtcactgatggaaacgagtatctgttccaagccaaagatgaagacgag
atgagcacctggatccaggccatcctgaacgccagcgtcgacagctgcgacgcaccgccg
ggcagcatccccggcacgccggcgtctgggcgcgctcagacgctgccggccgccgtcacg
ctcaccacggagtcgagtcccggcaagagagagaaggacaaagagaaggacaaggagaaa
cgcttcagtctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
