Sander vitreus (walleye): 144534014
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Entry
144534014 CDS
T11640
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
svit Sander vitreus (walleye)
Pathway
svit03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
144534014 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svit01009
]
144534014 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
svit04515
]
144534014 (pcdh7b)
Protein phosphatases and associated proteins [BR:
svit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
144534014 (pcdh7b)
Cell adhesion molecules [BR:
svit04515
]
Cadherins
Protocadherins
144534014 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Cadherin_2
Ig_Cad99C_N
Mid2
TMEM154
LYRIC
Adeno_E3_CR2
DUF1180
Gp80
Motif
Other DBs
NCBI-GeneID:
144534014
NCBI-ProteinID:
XP_078131743
LinkDB
All DBs
Position
19:6792040..6900548
Genome browser
AA seq
1256 aa
AA seq
DB search
MRTTGAVDYLYYCMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEVT
FTLESGSDFLKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSFSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSATLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPESNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNDPKFMQDVFTFYIKENLEPNSPVGMVTVIDADKGQNAEMSLFIEEEEDIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLLIMDDNDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVIATDADTGINADLNYSIIGGNPFKLFEIDGGTGVISLVGKLEQKHYG
LHRLVVQVNDKGQPSQSTTTLVHVYVNETLSNSTVVDTQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TPTSQQPKLSTFMSGNGSSGSSSAEQPGSQEILAMAAMANGDPATAHMMGDRNRNLLNKK
MASSSSSYEAFGSPSFGSPGNGEEALGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactattgcatgctcatcctgcagcttgtg
catcagcccgctgccaagcaagtgctccggtatcgtttggctgaggagggacccgccgat
gtcagagtagggaacgtagccggcgacttgggcattgttgccgggtccggtgaggtgaca
ttcacgctagagtcaggctcagattttttaaaaatagacaacataacaggtgagctcacc
accaatgagaggcgcatagaccgtgaaaaattacagcagtgccaaatgatatttgatgaa
aatgagtgtttcatagattttgaggtgtcagtgattgggccagcccaaagctgggttgac
ctctttgagggaaaagtaatcatattagatataaatgataacaccccgtctttcccttcc
cctgtcctgacactgtctgtggaggaaaacagacccattggaacgctttatctgctgccc
acagccacagacagagattttggcagaaatggaatagagcgatatgagcttatccaggac
aatggggaaaactcaaggcgcttgggctcttctggggattcgttctcggggaagaggaga
tttgaggaaggcgcaagcaggagcagcgtctttgaactgcaagttgctgacactactgat
ggagagaagcagcctcaactcatcattaaaggggcccttgatagggaacagagagactcc
tatgagctaacactgcgtgttagggatggaggtgatcccccgcgctcctcccaggccatt
cttagggtgatgatcactgatgtgaatgacaacagccctcgatttgagaagagtgtgtat
gaagctgacctaccagaaaacagctcccctggtgcccccatactgcagctcaaagcggct
gatgcagacgtgggggttaatggtcaaatagagtatgtgtttggggcagccacagagtca
gtaaggaggctgctgaggttggatgaaagcacagggtggctgagtgtgttgcaccgcatc
gaccgtgaagaagtgagccaacttaggttcacagtaatggcccgtgaccggggccagcca
cctaaaatggacaaggccactgtggtgttgaacatcaaggatgagaatgacaacgttcct
gctatagagataaggaaaattggacgcattttcttaaaagatggcatagccaacgtggct
gaggatgtggtggtggacacacccattgccttagttcaggtgtcagaccgtgaccagggg
gaaaacggcattgtgacctgcacagtggtaggggatgttccctttcagctcaaaccagcc
agcgagatggagggtgagcagaataaaaagaaatatttcctccacacgtctgcaacgctg
gactatgaggccacacaggaatacaatgtggtcatagtggcagtggactctggaagccct
agtctggcaagtaataactctcttatcgtcaaagtgggcgacactaacgacaaccctcct
atcttcagccagaatgtagtagaggtgtcgtttccagaaagcaatgcccctggcgaacgg
gtgacaacagtggcagccattgacgcagatagtgggaagaatgctgaaatagcctattcc
ctagactcatcagtaaatgggattttctctattgacgcagacagtggagacatccgagta
aacaccattctggatcgagagcaaacggagcgctacgaattcaaagtgatagccaaagat
aagggcataaacactctacagggctcagcaacagtggttgtccttgtggcagacaaaaac
gacaatgatccaaagttcatgcaggatgtgttcactttctatattaaagagaaccttgag
ccaaacagcccagtcggcatggtcacagtcattgatgcagataaaggccagaatgcagag
atgagtcttttcattgaggaagaggaggacatcttttctattgaaaatgacacagggact
attttctccactctgtcgttcgaccgagagcaaaagaccacatacacattccgtgtcaag
gctgtggacggtggtgatccacctagatctgccaccgccacagtttcactcttaataatg
gatgataatgacaatgcaccaacagtcactttcccaataaacagctcatacacccttctt
cctccctccagtaacatcagaacagtagtcagaactgttatagccactgatgccgacact
ggcatcaacgccgacttgaactacagcatcattggtggaaaccccttcaagctgtttgag
attgatgggggcactggagtcatttcactggtggggaagttggagcagaagcactatggc
ctccacagactagtggtccaggtaaacgacaagggtcagccttcacagagcaccacaaca
ctagttcatgtgtatgtcaatgagacactatccaattccacagttgtggacacccaggtg
gctaagagcctgagcacgtctctgaacaccaacattgccggtgaccccaactatgatcta
agcaaacagcggctaagcattgtcattggagtagtttctggcatcatgacggttatcctc
attattctagtcgttgtcatggcccgttactgccgtcccaagaataagaacggctatgag
gccggcaaaaaggatcacgaagacttcttcacgccacagcagcatgataagtccaagaag
cccaaaaaagataagaagaaacagaagtccaaacagccactctatagcagtattgtcacc
gtagaggcctccaaacccaatgggcagcgctacgatggcgtcaacgagaagctgtcagac
agtcctggcatgggacgctacagatcggtcaatggaggaccagggagcccagatctggcc
cggcactacaagtccagttcaccgctccctactgtccagcttcacccgcagtctccgaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgccaacacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaactatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagccagccccaggat
cctcaccagcagggatcgctgcagagctgctacgacagtggcctggacgagtcggagacg
cccagcagcaagagttcatcgggtccccggctgggcgcccttcccctccccgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactcc
cggcccttgcctgatgtagccatgactggcaagtgcacacgggaatgcgacgagtacggc
cactcggactcctgctggatgcctgtgcgcacgtcgcctgagcgacggccatccaagtca
acccccacctcccaacaaccaaagctttccactttcatgagcggcaacggcagcagcggc
agcagcagcgccgagcagcccggcagccaagagatcctcgccatggccgccatggccaac
ggagaccccgccactgctcatatgatgggcgaccgcaatcgcaacctgctcaacaagaag
atggcttcctcctcctcctcctacgaggcctttggctcgccttccttcggctcaccagga
aatggggaggaggcgctgggccaccccaccgaggagatccctctggcacctactggggag
tacaagcccacgtcctgtggtactctgactcgacgggaggtgtacctgtga
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