Sander vitreus (walleye): 144534058
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Entry
144534058 CDS
T11640
Symbol
dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
svit Sander vitreus (walleye)
Pathway
svit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144534058 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svit03041
]
144534058 (dhx15)
03009 Ribosome biogenesis [BR:
svit03009
]
144534058 (dhx15)
Enzymes [BR:
svit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
144534058 (dhx15)
Spliceosome [BR:
svit03041
]
Complex A
U2 snRNP components
U2 related factors
144534058 (dhx15)
Complex B
144534058 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
144534058 (dhx15)
Ribosome biogenesis [BR:
svit03009
]
Eukaryotic type
90S particles
Helicases
144534058 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
Cas3-like_C_2
nSTAND_NTPase5
AAA_25
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
144534058
NCBI-ProteinID:
XP_078131839
LinkDB
All DBs
Position
19:complement(11073427..11101091)
Genome browser
AA seq
758 aa
AA seq
DB search
MSKRHRLDLGDDSPSKKRPSDERDRDRDRDREERSRDRDRDRDRDRDGDRDVKSSAAPNS
LAAGSGGFLRQTPIQQPINPFTNLPHTPRYHEIMKKRQQLPVWEYRERFTDILMCNQSFV
LVGETGSGKTTQIPQWCVDMVRSMPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEV
GYSIRFEDCSSPKTLLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLK
EVVRQRADLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIR
TVIQIHMCEVDEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQ
QRIFEPPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL
VTAISKASAQQRAGRAGRTCPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLAALNDGGDLTELGSMMAEFPLDPQLAKMVIA
SCEFNCSNEILSITAMLSVPQCFVRPTEAKKVADESKMRFAHIDGDHMTLLNVYHAFKQN
HDSTQWCYENFVNYRSLMSADNVRQQLSRIMDRFNLPRKSTEFSSRDYYTNIRRALVTGF
FMQIAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW
LVKIAPQYYEMGNFPQCEAKRQLERIIAKISSKEYTQY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgacatcgtttagatttgggagatgattcgccgagtaaaaagagaccctct
gatgagcgtgaccgcgaccgggacagagaccgtgaagaacggtcgagggacagggaccgt
gatcgggatcgagaccgtgacggggacagagatgtgaagtcatccgcagcgcccaacagc
ctagctgcaggcagtggaggcttccttaggcaaacccccattcagcagccgatcaacccc
ttcaccaatctgccccacacgccacgctaccatgagatcatgaagaagcggcagcagctg
cctgtctgggagtacagagagcgcttcactgacatcctgatgtgtaaccagtcttttgtg
ctggtgggagagacaggctctggaaaaaccactcagatccctcagtggtgtgtggacatg
gtgcggtcaatgccgggaccaaagagagcagtggcctgcacccagcccaggagggtagcg
gccatgagcgtcgcccagagggttgctgacgagatggatgtcatgctgggccaagaggtg
ggctactccatcaggtttgaggactgcagctctcccaagaccctactcaagtacatgaca
gatggaatgttgctgcgggaggctatgaatgatcctctgctggagcgctatggtgtcatc
atcttggacgaggcacacgaacgcactttagctacagatatcctcatgggggtcctcaag
gaggtggtccgccagagggctgacctcaaggtcatcgtcatgagtgccacgctcgatgcc
ggaaagttccaggtgtactttgacaactgcccactgctaaccatccccggacgcacccac
cctgtggagattttctacacgccggaacctgagcgggactacctggaggcggccatccgc
actgtgatccagatccacatgtgtgaggtggatgaaggggaccttctgctcttcctcact
ggacaagaggaaattgatgaagcctgcaagcggatcaagagggaggtcgacgacctgggg
ccggaagtcggtgatatcaagatcatcccactttactccacactgcctccacagcagcag
cagaggatctttgagccacccccacccaataaaccaagtggtgccatcggaaggaaggtt
gtcgtgtcaacaaacatcgccgagacatccctgaccatcgatggtgtggtgtttgtaatt
gatcccggatttgccaagcaaaaggtatataacccacgtatcagagtggaatcccttttg
gttacagccatcagcaaggcctcggcccagcagagggcaggtcgtgctgggcggacatgc
ccagggaagtgtttccgcctttacacagagaaagcttacaagacagaaatgcaggacaac
acgtatccagagattctgaggtctaatctgggctctgtggtgctgcagctgaagaaactg
ggtattgatgacctggtgcactttgacttcatggacccaccagccccagagaccctgatg
cgagccctggagttgctgaactacctggcagcgctcaatgacggcggtgacctgacggag
ctgggctccatgatggcagagttccccctggacccccagctggccaagatggtcatcgcc
agctgtgaattcaactgttcaaacgagatcctgtccatcactgccatgttgtcagtccca
cagtgcttcgtccgacccacggaggctaagaaggtggccgacgagtccaagatgcgcttt
gcccacatcgacggagaccacatgacgctgctcaacgtctaccacgcctttaaacaaaac
cacgactctactcagtggtgctatgaaaatttcgtcaactaccgctcgctgatgtcagca
gacaacgtacggcaacagttgtccaggatcatggaccgcttcaacctgccgcggaagagc
actgagttcagcagcagagactactacaccaacatccgccgcgcgctggtcactggcttc
ttcatgcagattgctcacctggagcgcacaggccattacctgacggtgaaggacaaccaa
gtcgtacagctgcacccatccactgtgctggaccacaagccggagtgggtgctttacaac
gagtttgtgctgaccaccaagaattacatccgcacatgcactgacatcaaaccagagtgg
ctggtgaaaattgccccgcagtactatgagatgggtaacttcccccagtgtgaagcaaag
agacagttggagcgtatcattgcaaaaatctcatctaaggaatacactcagtactaa
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