KEGG   Sander vitreus (walleye): 144534728
Entry
144534728         CDS       T11640                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
svit  Sander vitreus (walleye)
Pathway
svit03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:svit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    144534728 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svit03021]
    144534728 (taf5)
   03036 Chromosome and associated proteins [BR:svit03036]
    144534728 (taf5)
Transcription machinery [BR:svit03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     144534728 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     144534728 (taf5)
Chromosome and associated proteins [BR:svit03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     144534728 (taf5)
    STAGA complex
     144534728 (taf5)
    TFTC complex
     144534728 (taf5)
    SAGA complex
     144534728 (taf5)
    SLIK complex
     144534728 (taf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_VPS8 WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR75_1st DSE1_N Beta-prop_Aladin Beta-prop_SCAP Beta-prop_TEP1_C PAC11 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Vps41 CFAP251_N Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 ASA1 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_NOL10_N Tricorn_2nd Beta-prop_Nup120_160 WD_LRWD1 PEP5_VPS11_N LisH_PAC1 PROPPIN CDK5RAP3 Beta-prop_ACSF4 LisH_TPL Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 144534728
NCBI-ProteinID: XP_078132841
LinkDB
Position
2:complement(10573022..10579389)
AA seq 749 aa
MAAVQGGLADTNEEKDIKTEPSNDGFGNNNANDGRVLSTSPGSSASAGINKSAAGAPEDQ
QTLLAVLQFLRKNKLTESVEILRREAGLPEDSLELKGSDSSGAGSGVAAGSGDKEGGDAS
SLLNRVTISSSAVAQAPTKAAGEDQPDVNVVLSAYNQQGDPPLYQVYYSGLKKFIESVLD
CHRAELSQLFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRILSSLSKREH
MRGNETLMDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKG
QIDAMSGSLAGEGKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSM
GSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYSFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDE
KTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD
THFSPHGYYFVSGGHDRVARLWATDHYQPLRMFSGHLADVTCTRFHPNSNYVATGSSDRT
IRLWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGH
TDTIYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHVHLQDNSQELLL
GTYMSKSTPVIHLHFTRRNLLLATGAYNP
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggcggccgtacaaggtggtctggccgacacgaacgaagaaaaagacataaaaacagaa
ccatcaaacgatggctttggaaataataatgcaaacgacggaagagtgctctctacctcc
cccgggtccagtgcttcggctggaattaataaatctgcggcaggagccccggaggaccag
cagacgctgctggcagtcctgcaattcctcaggaagaacaaactgaccgagtccgtcgaa
attttgcgtcgtgaagcgggattaccggaggattcactggaactgaaggggagtgattcc
tccggtgcaggctcgggggttgctgcgggcagtggggacaaagaaggcggggatgcgagc
tctcttctcaaccgggtgaccatctcatcctcggctgtagctcaggcgccaactaaagct
gctggggaggatcagccagatgtcaacgtggtgctgtccgcttacaaccagcagggagac
cctcctctgtaccaggtttactacagcggcctgaagaagttcatagaatcggttttggac
tgtcaccgagcagagctgtcacagctcttctacccgctgtttgttcacatgtatctggaa
ctggtgtacaacaatcacgagagtgaggccaaggcgttctttgagaagttcagtggcgat
caagagtgttactacgaagacgacttgcgtattttgtccagcctgtccaagagggagcac
atgagaggcaacgagaccctgatggacttccgcaccagcaagttcgtcctgcgtatctcc
cgtgactcttaccagctgctgaagaggcacctgcaggagcgtcagaacaaccagatctgg
aatatcatacaagagcacctctacattgacatctttgatggcatgccacgcagcaagggc
cagattgatgccatgtccggcagcttggcaggagagggcaaacgagaggccaataaggct
aaggtttactatggattgctgaaggaaccggaaattgagctgcctcttgatgatgaggac
gaggaggcagagaatgaggagggtaaacccaagaagaagaaacccaaaaaggacagcatg
ggctccaagagcaagaagcaggatcctaatgcaccttctcaaactaggatacctcttcca
gaactgaaggattcagacaagctggacaagatcatgtacatgaaggaggccaccaagagg
atccgcctgggaccagataacctgccctccatctgcttctacagttttctcaatgcttac
cagggtctgactgcagtggacttcacagatgactccagcctgatcgcgggaggcttcgct
gactccacagtacgggtgtggagcgtcacaccgaaaaagctccgcaaggtcaagtctgca
gcagacttgaatctgatcgacaaagagtcagacgatgtgctggagaggatcatggatgag
aagacggccagtgagtcaaagatcctctatggacacagtggcccggtgtatggcatcagc
ttcagcccagacagaaactacttgttgtcaagttctgaagatggtacagtcaggctatgg
agtctccaaacatttacttgtctggtgggctacaaaggccacaactacccagtgtgggac
acccacttttccccccatgggtactattttgtctccgggggacatgaccgagttgcccgt
ctgtgggctacagatcactaccagcctctgcggatgttttctggtcacctagctgatgtc
acttgcacccgcttccaccccaactctaattatgtggccacagggtcttctgatcgcacc
atccggctctgggatgtcctgaacggaaactgcgtccgcatcttcaccggtcacaagggt
cctatccatgcgctggccttttctcccaatgggaagttcttggcttcaggagccactgat
ggcagagttcttctgtgggacattggccatgggctgatgattggagagcttaaaggccac
acagataccatctactcgctccggttcagcagagacggggagatccttgcctccggatca
atggacaacacggttcgtctgtgggatgccatgaaagcttttgatgatttagagaccgat
gatttcacagcagctacaggacacgtccatctacaagataactctcaggagcttctgctg
ggcacctacatgtctaaatctacacctgttatacaccttcacttcacccgcaggaacctg
ctgctggccactggggcctacaatccatga

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