Sander vitreus (walleye): 144534917
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Entry
144534917 CDS
T11640
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
svit Sander vitreus (walleye)
Pathway
svit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144534917 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svit03041
]
144534917 (aqr)
Spliceosome [BR:
svit03041
]
Complex B
Other components
Prp19-related factors
144534917 (aqr)
Complex C
144534917 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
DEAD
UvrD-helicase
UvrD_C_2
AAA_16
SLFN-g3_helicase
AAA
Parvo_NS1
AAA_22
PhoH
DnaB_C
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
144534917
NCBI-ProteinID:
XP_078133172
LinkDB
All DBs
Position
20:complement(11308680..11362025)
Genome browser
AA seq
1472 aa
AA seq
DB search
MATMEKQTPAKKAAAPSVSQINAEYVTQLANKYWAPHAKNKLPFDPKVMEDVYEKEILKS
KFAIRKIMLLEFSQYLENYLWVNYTPKVSSNAYLMSICCIVNEKFRENVPAWEVFKREPS
HFPFFFKCVMEAALAGEEACLNLKEQTVLLVFLDHCFNSLEVDLIREQVQQLISLPMWMC
LLPSRLQQELKKVPKLQKFWNLIKKKCDKMDADPAEQAKKERTFLSALIKKFLGVLMSIP
PSGPVSMDKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVSCHLSSLTQREKEGHL
FCQLLDMLKFYTGFEINDQTGNALTGKEMTTLHYDKILSLQRAAFAHFPELQDFALSNVA
AVDTRESLTKHFGHLSPNTLHQVASYLCLLPELPEGQDTTYEKEVLLELLVSRHERRISQ
IEQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLES
TYEIRQDIEDVVWRMKPWQSEYGGAVFGGWARMAQMITSFSIVEVAKPNIGESWPARVRA
DVTVNLNVQDHIKHEWEGLRKHDVCFLITVRPNLPYGTRFDRRQPFVEQTGLVYVRGCEV
QGMLDDKGRVIEEGPDPKPKLRGDARTFRVWLDPNQYQQDMTSSIQSGTEDPYETFNIIM
RRKPKENNFKAVLETIRNLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISTLDFNDT
FLSLDHLRLCFPGYTIKVTEENPDLQVFPFRIKFPVSNKADKVKKRKADEEVEDKEEGMT
LMVEPYVTLNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI
ISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYG
RVNYVLARRLELLREVGRLQESLDVPGDVSYTCETAGHFYLYQVISRWEEYMSKVRPKQG
KTVEVQAVAAYFPFHKYFSNAPQPVFKGRSYEEDMDIAEGCYRHIKKIFTQLEEFRAFEL
LRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPL
LLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTIDLDAQ
GRARASLCNLYNWRYKHLGNLPHVQQLPEFQVPNPGLTFDFQLINVEDFNGVGESEPNPY
FYQNLAEAEYTVALYMYMRLLGYPADRISILTTYNGQKHLIRDVINQRCAGNPFFSQPNK
VTTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFEL
TPVFNQLTARPMQLHIRPHEYYSQEQPRDASGQPDQIIKNMPEMTNLVYNMYMHMIQTSQ
KYKQQQQKLAMPPQQTKTVAVVEEAPVSSGEPQEETPMEQETPEGEATSEPNSEDTSEKE
ENQDTVGHAKMPEHPGRDSDSDGEDSGEEQKQ
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaacaaacccccgctaaaaaggctgctgcgccatctgtgtctcag
attaatgcagaatatgtcacacagttagctaataaatattgggctcctcatgcaaagaat
aaactaccgtttgaccctaaggtgatggaagatgtttatgaaaaagagattctcaagtcc
aaatttgccataagaaaaattatgctgcttgagttcagccagtatcttgagaactaccta
tgggtgaactacactcccaaggtgtccagcaatgcctacctcatgtccatttgttgcatc
gtcaacgagaagttcagagaaaatgtcccagcctgggaggtgttcaagagggagcccagc
catttcccattcttcttcaaatgtgtgatggaagctgcattggcaggcgaggaggcttgc
ctcaatctgaaggaacaaactgtgctgctggtcttcctggaccactgtttcaacagtctg
gaggtagatttgatcagagagcaggtgcagcagctcatctctctgcctatgtggatgtgc
ctcctaccatccagactccaacaagagcttaagaaagttccaaagctgcagaagttctgg
aatctaatcaagaagaagtgtgataagatggatgctgacccagctgagcaggcaaaaaaa
gagaggaccttcctctcagctctcattaaaaagtttctcggagttctcatgtcaattccg
ccatcagggcctgtatccatggacaaagtacattactgtgagagattcattgaactcatg
attgatttggaggccctgctgcccaccaggcgttggttcaatacagtgttagatgactct
cacttggtagtcagctgccacctgtccagcctcacccaaagagagaaggagggacacctc
ttctgccagttgctggatatgctgaagttctacacaggttttgagatcaatgaccagaca
ggaaatgccctgacagggaaagagatgaccactctgcactatgataaaatcctctccttg
cagagggcagcttttgctcattttccagagttgcaggactttgctctgtctaacgtagca
gcagtagacactcgagaatccttgacgaaacactttgggcatctcagtcccaatacgctc
caccaggtggcctcatatctgtgtctgctgccagagctgcctgaaggtcaagacaccacc
tatgagaaggaggttctccttgagctgctggtgtcccgtcatgagcgcagaatctctcag
attgagcaacttaaccagatgcctctttatccaacagagaagataatctgggatgagaac
atcgtcccgacagagtactactcaggcgaaggctgtctagcactacctaagctgaatctc
cagttcctgactctccatgactacctgttgaggaactttaacctctttcgtctagagtcc
acctatgagatcaggcaggatatagaggatgtggtgtggcgtatgaaaccatggcaatca
gagtacggtggagcggtgtttgggggctgggccaggatggctcagatgatcacctctttt
tccatagtagaggttgccaagcccaatattggagagagctggcctgcccgtgttcgagcg
gatgtcactgttaacctcaacgtacaagatcatattaagcacgagtgggaagggctgcgg
aagcatgacgtttgctttctgatcacggtgcggcccaacctgccctacggcacacgcttc
gaccggcgccagccctttgtggagcagactggcctggtgtatgtgagaggctgcgaggtg
cagggtatgctggatgacaagggacgtgtcattgaagaaggacctgacccaaagcctaag
ctgcgaggagatgccagaaccttccgtgtatggctggacccaaaccagtatcaacaggac
atgaccagcagtattcagagtggcaccgaagacccatatgagactttcaacatcatcatg
agacgcaaacccaaggagaacaatttcaaggcagtgctagagaccatcagaaacctgatg
aacacagagtgtgttgtcccagactggcttcacgacatcatcctcggctatggcgaccca
ggcagtgcccactactccaaaatgcccaatcagatctccacattggacttcaatgacacc
tttctgtccctggaccatttacgtttgtgtttccctggttacaccataaaggtcaccgag
gagaaccccgatctgcaagtcttccctttcagaatcaagtttcccgtctcaaacaaagca
gacaaagttaagaagagaaaggctgatgaagaagtggaagacaaagaggagggcatgacc
ttgatggttgagccctatgtcaccctcaaccgtggcccatatccctacaaccagcccaaa
cggaatacaattcagttcactcctactcagattgaagccattcgagctgggatgcagcca
ggactcaccatggttgttggaccaccaggtaccggaaagacggatgttgctgttcagatc
atctcaaacctctatcacaactttcctgagcagaggaccctcatagtcacacactctaac
caggctctgaaccagctgtttgaaaagatcatggctctagacatcgacgagcgccacctc
ctgcgtctgggccacggagaagaggagctggagactgagaaggactttagcagatatggc
cgagtaaactatgtccttgccagaagactggagctcctcagagaagtggggagattacag
gagagcttggatgtcccgggagatgtttcttacacctgtgagactgctggacacttctac
ctctaccaggtgatttctcgctgggaagagtacatgagcaaagtcaggcctaaacagggc
aagacggtggaggtgcaagctgtggctgcatactttcctttccacaagtacttctccaac
gccccccagcctgtgttcaagggccggtcatatgaagaggacatggacatcgcagagggc
tgttaccgccacatcaagaaaatatttacccagctggaggagtttagggcttttgagctg
ctaagaagtggactggaccgctccaagtatctgcttgtgaaggaagccaaaatcattgcc
atgacctgtacacatgctgcactcaaacgtcatgacctggtggagctgggatttaagtat
gacaacatcctgatggaagaagctgctcagattctggagatcgagaccttcatccccctc
ctgttacagaacccagaggatggctacagcaggctgaaacgttggatcatgattggagac
caccaccagttgccccctgttatcaagaacatggccttccagaagtactccaacatggag
cagtctctcttcacccgatttgtgcgccttggagtgcccaccatagatctggatgcacag
ggtcgtgcacgtgcaagcctgtgtaacctgtacaactggcgctacaaacacctggggaat
ctgcctcatgttcagcaactgcctgagttccaggtgcccaaccccggcctgacctttgac
ttccagttaattaatgtggaggacttcaatggagtgggagaatctgagccgaacccttac
ttctaccagaacctggcagaggcggagtatactgtcgctttgtacatgtacatgcgttta
ctgggctaccctgctgaccgcatcagcatcctcacaacctacaatggacaaaaacacctg
atcagagacgtcatcaaccagcgttgtgctggcaatcccttctttagtcagcctaacaag
gtgacaacagtggacaggttccagggtcagcagaatgactacatcatcctctcactggtc
cgcaccaaagccgtgggacatctgagggatgtaaggcgtctggtggtggccatgtcaaga
gccagacttggtttgtacatctttgcccgggtgtcgttgtttcaaaactgctttgagctg
actcctgtcttcaaccagctcactgccagacccatgcagctacacatcaggccgcatgaa
tactacagccaggaacagccgagagatgcttctggacagccagaccaaatcattaagaac
atgccagagatgaccaacctggtgtataatatgtacatgcacatgatccagacctcccag
aagtacaaacagcaacagcagaaactggctatgcctccacaacaaaccaagacggttgct
gtggtcgaggaagcgccagttagctctggggagccgcaggaagaaacccccatggagcag
gaaaccccagaaggagaggcaacctcagagccaaactcggaggacaccagtgagaaggaa
gaaaatcaagatacagtgggccatgctaagatgccagagcatccaggcagagacagcgac
agtgacggggaggacagtggagaggagcaaaagcagtag
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integrated database retrieval system
