Sander vitreus (walleye): 144537665
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Entry
144537665 CDS
T11640
Symbol
arid2
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
svit Sander vitreus (walleye)
Pathway
svit03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svit00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
144537665 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svit03000
]
144537665 (arid2)
03021 Transcription machinery [BR:
svit03021
]
144537665 (arid2)
03036 Chromosome and associated proteins [BR:
svit03036
]
144537665 (arid2)
Transcription factors [BR:
svit03000
]
Eukaryotic type
Helix-turn-helix
ARID
144537665 (arid2)
Transcription machinery [BR:
svit03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
144537665 (arid2)
Chromosome and associated proteins [BR:
svit03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
144537665 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
144537665
NCBI-ProteinID:
XP_078137580
LinkDB
All DBs
Position
23:complement(5502101..5548743)
Genome browser
AA seq
1674 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSPFRKIPIVGGKELDLNALYIRVVSLGGF
AKVSDKNQWIELGDEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDEEAQPGNPKA
SLPIGAIPSSYNYQQHIVSDYLRQSYGLSLDFVPPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHAMQLDKDPKLVTLLLAHAGVFDDSLGSFSGVFGTDWKEHTSRDFIRFWKEV
VEDVEVRELIWDKNSPAQDGMSCEGRWQSLFHPPRNLGISDMEAQRVLQIAVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLMSRDRFLKMRAMEILGNLSKAEDNGVLICEYVDQDSYREVIMLLTLPDLMLLMASL
EVLYLLAQLGDIPCSKIASVDHSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANAEQAAE
VRPQLVEQVPAAAQGAAAPVTRVPVQSTPPPPGIVELDGEKFTLQWLNAHFETNPEGSVS
RSEIYSEYLATCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQEETKATGQLQILLVGLRR
RSIPLPIQLYYQQPQQQNPAAAPTPPAAPGDPQALPPGLPLGPPSLGAQFVRALGPSLST
PGAAPSMALTAQEPLHQSHPTVSRHLVPPQASPQLPPNPLAAVQQQVRPGPVVQIPTLAP
AAQKHSPQSPGAAPAAQQHSPMLPTGTPVTLFQQVPQGHILTARVQGVCPPITQHPALPQ
TPLLSGPQGDAPQVEPRCVAGTSTPSSSIQVGAGQAFSIAGVPNSQGSRVTFQNIAPKPA
PSQSGGPAATIATPNQQPPPQQQAQSVVIVGPDPQQSPAYTPAIHQIVLTNPSALPGAQT
IQIAGQPGAASSPWPPPASHSNTQPNQTVSHALSMKPHQQQPHQQQQQPQLQFISPNPPS
QPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPPPNSTIAPGPQVIYQTSYSTQNPSP
QPQQLNVQLVPGQLPAAGAPALQTVQLLPGQLISTSSPGAATIIQGPTAAGQVTFTVVPN
TGFTSTAAVAAVSQGAVATGVPPPPFSAATVAHHAPATPPPAPLRGDKIICQKEEEAKDA
TGLHIHERKIEVMENSSLAEGDSNGKTSNGDVAAGAKLLNGRKCMESNLPPYHSGNSQGA
LNGPATEGHPANGKQALSPSPNAPLEGNPDPKKTLVNGVCDFDRGDGGGNINKNIPNHIA
SKQYLGNGEVGPSEKSHGSDPPLPSPPPPQQDTAKAQQAERLANGPQAAGNRPPSELTNG
PLGQGHAAHVLRQQLLPKSTLPSTVTVTSPSPAAPPANGVASEARGLKRPADSEDRSSAS
SGIPNKVGVRIITISDPNNAGSSATMVAVPAGTDPSTVAKVAIENATQQRNCSPALAAGL
TPTFTPPPVSQPAPGGNHSPHLSAQQTPAAPPEQSRKAGQNFKCLWQSCKRWFETPSRVF
YHAATQHGGKGVYGGHCQWEGCEPFPRQRLSFITHLQDKHCSREALLAGLKLEEQQAQSP
NQTSSQTPPAAGSSQTPRAPKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPVTKHIRL
TAALTLKNIAKHSDCGRMLVKRHETHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctactagatcagcgaaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccaaagcagaggatcgcctttcaggaagattcctatcgtg
ggtgggaaagagctggacctgaatgctctctatatcagagtcgtctctttaggtggattt
gctaaggtctctgacaaaaaccaatggattgaacttggagacgagtttaactttccaagg
agttgttccaacgctgcatttgctttaaaacagtactaccttcgatacttggagaagtat
gagaaagtgcaccacttcggtgaggatgatgaagaagcgcagccggggaatcccaaagcc
tctcttccaatcggtgcaattcccagctcctataactaccagcagcacattgtatcagac
tatctccgccaaagctatggactgtctctggatttcgtcccgccgtgtgactacaacaaa
ctggtgctgtctctcctttcggggctacccaacgaagtggactttgctgttaacgtttgc
acactgctctccaacgagagcaagcacgccatgcagctggacaaggaccccaaactggtc
acgttgctgctggcgcacgccggcgtcttcgacgactcgctaggcagcttctcgggggta
ttcgggacggactggaaggaacacacctcccgggactttatcaggttctggaaggaggtg
gtggaggacgtggaagtcagggagctgatctgggacaagaacagcccggcacaagatggt
atgtcgtgcgagggccgctggcagagcctcttccacccgccgcggaacctgggcatcagc
gacatggaggcccagcgggtgctgcagattgccgttatcctgcggaacctctccttcgag
gaggccaacgtcaagctgctggcggccaaccgaacgtgcctgcgcttccttttgctctgt
gcccactgtaacctcatctcactccgacagctcggactcgacacgttgggcaacgtggct
gccgagctccagctggatcccgttgactttcggacaactcatctgatctttcacaccatc
accaaatgtttaatgtccagggacaggtttctcaaaatgagagccatggaaatcctgggc
aacctcagcaaggcggaggacaacggcgtgctgatctgcgagtacgtggaccaggactcg
tacagggaggtaataatgctgctcaccctgccggacctcatgctcctcatggcctctctg
gaggtgctgtacctgctggcccagctcggagacatcccctgcagcaagatcgcctccgtc
gaccatagcatagacctgttagtgcggttagtatcggtggacctccatacgtttggaccc
gacgccctgacagcggtgcgattgatcgagcatcaggccaacgccgagcaggcggccgag
gtccggccacagctggtggagcaggtgcctgcagccgcgcagggagcagcagcgcctgta
acgagggtcccagttcaatccactccaccgccacctggtatcgttgagctcgatggggag
aaatttacactgcagtggctaaacgcacactttgagacaaaccccgagggctcggtgtcg
cgatcagaaatttactccgagtacttggccacttgcagtaaaatgggacgaagcaacatc
ttgaactccaccggcttcctcaagtgtctgcggactgtctttcccaaccacacaatgcgg
cggcaagaggagaccaaggccaccggtcagcttcagattctcctggtagggctgaggcgc
aggtcgatccccctgcccatccagctgtactaccagcagcctcagcagcagaatccggca
gcagctccaacgcctccagcagcccccggagacccccaggccctgcctccaggcttacct
cttgggcctcccagccttggagcccagtttgtcagggccctgggccccagcctcagcacc
cccggcgccgccccatccatggccttgaccgcacaggagcctcttcatcaaagccacccg
actgtttcccgacacctggtgcccccgcaggcgtctccgcagttaccgccgaaccctctg
gcggccgtgcagcagcaggtccgacctggtccagtggtccagattccgacgttggcaccg
gccgcccagaagcacagcccccagagccccggcgccgctcctgcagctcagcaacactcc
cccatgctccccacggggacccccgtcacgctatttcagcaggtaccgcagggccacatt
cttaccgccagggtgcaaggcgtgtgccctccgatcacccagcacccggccttgcctcaa
acccctctcctgtcggggcctcagggtgacgctccccaggtggagccccggtgtgttgct
gggacatcgacaccctcttcttccatccaggtgggggccggtcaggcgtttagtatcgct
ggcgtgcccaattcccagggctcacgcgtcacatttcagaatatcgcccccaaaccagcg
ccaagccagtcaggtggaccagcagccacgatagccactcccaaccagcagcctccgcct
caacagcaggcgcagagtgtcgtaatagttggccccgacccccagcagagcccagcctac
acccctgccatacaccagatcgttctcaccaacccctccgcccttcccggtgcccagact
atccagatagcagggcagcccggagctgcttccagcccctggccgccccctgcttctcac
tccaacacccagcccaaccaaactgtcagccacgcactgtccatgaaaccccatcagcag
cagccgcatcaacaacagcagcagccgcagctccaatttatttccccaaatcccccctct
cagcctacctccaccgagtccagcttgatcaaacagctactgcttccaaagcgagggcct
tctactccgggagggaagctcatcctacccgctccacaggtgccccctcccaacagcacg
atagccccaggtccacaagtcatctaccagacgagctacagcacccagaatccctctcct
cagcctcagcagctcaatgtccagctggttcctggtcagcttcctgctgcgggagcccca
gccctccagacggtccagctcttgccaggccagctcatttccacgagtagccctggggca
gctaccatcatccagggccccacggcggctggacaggtcacgttcaccgtggtccccaac
actggcttcacctctaccgctgctgtcgccgccgtcagccagggtgccgtggctactgga
gtccccccaccgccgttctctgctgcgacggtggcccaccacgccccagcaactccaccg
ccagctcccctcagaggagacaagatcatttgtcaaaaggaggaggaggccaaggacgcc
acggggctgcacatccacgagcgaaagatcgaggtaatggagaactcgtctttggcggaa
ggcgactccaatggcaaaaccagcaacggcgacgtcgcggcaggtgccaagctgctaaac
ggtcggaagtgcatggagtcgaatctacctccataccactcagggaacagccagggggcg
ctcaacggcccggccacggagggtcaccctgctaatgggaagcaggccctctcccccagc
ccgaacgcccctctggagggcaaccccgaccccaaaaagactctggtcaacggggtgtgt
gactttgatcggggtgacggtggtggcaacataaacaaaaacattccaaatcacattgct
tccaaacagtacttggggaatggggaggtgggcccctctgagaagagtcacgggtcagac
ccccctcttcctagtcctcctcccccccagcaggacactgccaaagcccagcaggctgag
cgcctggctaacggaccccaggcagccggcaacaggcctccctcggaattaaccaatgga
cctttggggcagggccacgccgcgcatgtgcttagacagcaactgctccccaaatctacc
ctcccctccactgttaccgttacctccccgagtcccgccgcccctcctgcgaacggagtg
gcctccgaggctcgaggtctcaagagaccagccgatagcgaggaccgcagctcggcttcc
tcggggatccccaataaagtgggcgtgcgcatcatcaccatcagtgaccccaacaacgcc
ggcagcagtgccaccatggtggcggtgcccgcaggaacagacccaagcacagtagccaaa
gtagcaatagagaacgccactcagcagaggaactgctcacccgcactggcagctggctta
acgcctacgtttaccccgccccctgtatcccagcctgctccggggggtaaccatagcccc
cacctctcagcacagcaaacccccgcagcaccgccggagcagagcaggaaagcagggcag
aacttcaagtgtctgtggcagtcctgtaaacggtggttcgaaacgccgtctcgggtgttt
taccacgcggcgacgcaacacggcgggaaaggtgtatatggaggccactgtcaatgggag
ggatgtgaacccttcccccggcagagactgtcattcatcacgcacctacaggataagcac
tgttctcgagaggctttgctggctggactcaaactagaggagcagcaggcgcaaagtccc
aatcagacttcttcccagactccgccagcggcaggcagttctcagacaccgcgagcaccc
aaagcaatcgtgaatcatccgagcgcagctctcatggccctccgcagaggctctcgaaac
ctggtcttcagggacttcactgacgagaaagagggaccagtgaccaaacacatacgacta
actgctgccttaacgttaaagaacatcgccaagcactctgactgtggtcgcatgttggta
aagaggcatgagacacacctatctgtgctcgcgctaagtaacatggaggtttccaccacg
ctcgccaaatgcctttatgaactgacgcgctcgctccaggcttaa
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integrated database retrieval system
