Subdoligranulum variabile: NQ490_00450
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Entry
NQ490_00450 CDS
T08454
Symbol
rlmN
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
svj
Subdoligranulum variabile
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svj03009
]
NQ490_00450 (rlmN)
Enzymes [BR:
svj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
NQ490_00450 (rlmN)
Ribosome biogenesis [BR:
svj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NQ490_00450 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Fer4_12
Radical_SAM_2
Peptidase_C23
DUF1967
Motif
Other DBs
NCBI-ProteinID:
UWP69725
LinkDB
All DBs
Position
complement(100044..101081)
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AA seq
345 aa
AA seq
DB search
MRKICLSDYTLAELTAYIVGLGQPKFRAKQIFKWLHQKLVTEFTQMTDQPKTLLAVLEEQ
CTIAVPTIRRKQQSKDGTVKYLLQLADGNCIETVLMRYKYGNTVCVSTQVGCAMGCRFCA
STQAGRVRDLTAGEIAAEIYTAQKDSGERVSHIVLMGIGEPLHNFDNVMDFLEIISCPEG
VNIGMRNISLSTCGLVPKIDELAKRHLQLTLSVSLHAPDNVTRSGMMPVNDAYPLEELIP
ACRRYQKETGRRISFEYSMVRGVNDSSEMAQKLARLIHGMGAHVNLIPINPVDGSPYSAT
DEANVRRFQQELEHLGVNATVRRRLGTDISAACGQLRREDAQAST
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaatctgtttgtcggattatacgctggcggaactgactgcctatatcgtgggt
ctgggccagcccaaattccgtgccaagcagatctttaaatggctgcatcagaagctggtg
acggagttcacccagatgacggaccagcccaagacgcttttggcggtgctggaggagcag
tgtaccattgcggtaccgacgatccgccgcaaacagcaatccaaggatggaaccgtcaaa
tatctgctgcagctggcagacgggaactgtattgaaacggttctgatgcggtataaatat
ggcaacacggtatgtgtttccacgcaggtggggtgtgccatgggatgccgtttctgcgcc
tctacccaggctggccgcgtgcgggacctgacggcgggggaaatcgcagcagaaatctac
acggcgcagaaggattccggtgagcgtgtttcccacatcgttctgatgggaatcggagaa
ccgctgcacaattttgacaacgtgatggattttctggagattatatcctgcccggaaggc
gtcaatattggcatgcgcaatatcagcctttccacctgcggtctggtcccgaaaatcgat
gaactggccaaacggcacctgcagctcaccttgtcagtttcgctgcatgcgccggacaat
gtgacccgttccggcatgatgccggtcaatgatgcttatccgttggaggagctgattcct
gcctgccgccggtatcagaaggaaacagggcgtcgtatcagctttgagtattccatggtg
cgcggcgtcaatgatagttcggagatggcacagaaattggcccggctgatccatggtatg
ggtgcgcatgtgaatctgattcccatcaatccggtggatggcagtccctactccgcaacg
gatgaggccaatgtgcgccgctttcagcaggaattggagcatctgggggtcaacgcaacg
gtgcgtcggcgcttgggaacggatatcagcgccgcctgcggacagttgcgccgtgaagat
gcgcaggcttccacctga
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