Subdoligranulum variabile: NQ490_01260
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Entry
NQ490_01260 CDS
T08454
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
Organism
svj
Subdoligranulum variabile
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
vRNAP_dom_2
Sigma_reg_N
Motif
Other DBs
NCBI-ProteinID:
UWP68507
LinkDB
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Position
complement(264084..266627)
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AA seq
847 aa
AA seq
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MSNPVNNPNPHFRAQVLRRTLIAIAIFLIFFFGILIYQLYALQLRDAELYRTEAVTQQMQ
DTELPATRGSIYSANGKLLAKSNTVWNIIANPLQSQKNGATTAQLQRAAEEIATLLDDGT
TADSIFNILTATNANGELYEYRVVAKGVEKPVADAIIEYSMNYRTEPPAGEEQGYRIVVL
STEQASTRSYPYGAFLSSVLGFCNGDGSGAYGLEKSYDDVLSGTPGRSIAETNVSGEVLA
NAEADVYPAIDGNNLNLTIDENVQAIVEEYLAEAMNTFSVHGRGSAIVMNVKTGAILAMA
SLEQFDPNSPYTIYDEKMQAILDKEELDDEDIDWLKSRLGEDEVADIIADGKISRETTTD
EEGNTVSSEYTQLQGMMREAQWKNKNITELYMPGSVFKLITASAGLDSGIMTAEQTFYCN
GEFTVDSGTVWEHTYHCANDAAHGLLDMAGALNHSCNLWFIQAAQTLQPTVFYDYIQAFG
FTQTTGIDLPNETRWTSVYNAEQMAQVDTNLYTAAFGQNEAITPMQMATAVAAVANGGYL
VTPYVVDSITDNDGNVVQKTETNIRRQVISEEVSEQILAMMETSVDPNSESPNNYHSNKN
AYVAGYRIGGKSGTAERTDRELRYDGDYYKTMSFAAVLPIDDPEIEVFVVLDDPRWLYDY
ASEVVAPVVGNIISEVAPYLGIEQDSNYNPSGTVTVQTCLNYTWTNAQVTLNQLGLKHKL
IGDNGTIVYQYPYGGSKVPAGSTIYLYTQSDRDAMTTVPDVVGKSSSFAEQMLRAANLNV
QYEGDSGGKVVAQSVEANTSTAYGTIITLTMESSNTTQTTEPVSEEPASAAESTSADTAQ
SDSQAQE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccagtcaacaatcccaacccgcatttccgcgcccaggtactgcggcgcacg
ctgatcgccattgccatcttcctgatttttttctttggcatcctgatttatcagctgtat
gcactgcagctgcgggacgcagagctgtaccgcaccgaagcggtgacccagcagatgcag
gataccgaactgcctgctacccgcggttccatctacagcgccaacggaaaactgctggcc
aagagcaacacggtgtggaacatcatcgccaacccgctgcaatcccagaaaaacggagct
accaccgcccagctgcagcgagccgcggaggaaattgccacgctgttggacgacggcacc
acggcggacagtattttcaatattctgacagcaaccaatgccaacggcgaactttatgag
tatcgcgtggtggccaagggcgtggaaaagccggtggcagatgccatcatcgaatattcc
atgaactaccgcacagaaccgccggccggggaggagcagggataccggatcgttgtactc
tccacggagcaggcatccacccgcagctatccctatggagcgtttctttcctcggtgctg
gggttctgcaacggcgacggttccggtgcgtacggtctggaaaaatcctatgacgatgtg
ctttccggtacgccggggcgcagcattgccgagaccaatgtcagcggtgaagtactggcc
aacgccgaagcggatgtctacccggccattgacggcaacaatctgaacctgaccatcgac
gagaatgtgcaggccatcgtggaagagtatttggccgaggccatgaataccttcagcgtg
catggtcgcggcagcgccatcgtcatgaacgtcaagaccggcgccatcctggcgatggcg
tcgctggaacagtttgaccccaacagtccctataccatctacgatgaaaagatgcaggcg
atccttgataaggaagagctggatgacgaggatatcgactggctcaagagccgcctgggc
gaggatgaggtggccgacatcattgcggacggcaagatcagccgggaaaccaccaccgat
gaggagggcaatacggtcagcagcgaatatacccaactgcagggtatgatgcgcgaggcc
cagtggaagaataagaatatcaccgagttgtatatgcccggttcggttttcaaactgatc
acagcatcggcgggccttgactccggtattatgacggccgagcagaccttctattgcaac
ggcgagtttacagttgattccggcaccgtgtgggaacacacatatcactgcgccaacgat
gcagcccacggtctgctggatatggcgggcgctctgaaccacagctgcaacctgtggttc
atccaggcggcacagaccttgcagcccacggtgttctacgactatatccaggctttcggg
ttcacccagaccaccggcatcgacctgcccaacgagacccgctggaccagtgtgtacaac
gccgagcagatggcccaggtggacaccaacctgtatacggccgcttttggtcagaacgag
gccattacgccgatgcagatggcgacagcggtggcagcggtcgccaacggcggctatctg
gtcaccccctatgtggtggattccatcactgacaatgacggaaacgtggtgcagaaaacc
gagaccaacatccgccgccaggtgatttccgaggaggtcagcgagcagattctcgccatg
atggaaaccagcgtagaccccaacagtgaaagccccaataactaccactccaacaaaaat
gcttatgtagcgggctaccgcattggcggtaaatcgggcacggcagaacgcaccgaccgg
gaactgcgctatgacggcgactattacaagaccatgagttttgctgccgtattgcccatc
gatgatcctgagatagaggtcttcgtggtattggacgacccccgctggttgtatgactac
gccagcgaggtggtggcccctgtggtgggcaacatcatcagcgaggtggcgccctatctc
ggaatcgagcaggattccaactacaatcccagcggcaccgtcacggtccagacctgcctg
aactacacctggaccaatgcgcaggtgaccctcaatcagctggggctgaaacataagctg
atcggggacaacggtaccattgtgtaccagtatccctacggcggaagtaaggtcccggcg
ggatccaccatctacctgtatacccagagcgaccgggacgccatgaccacggtaccggac
gtcgtcggcaagagcagcagctttgccgagcagatgctgcgcgcggccaacctcaatgtg
caatacgagggggacagcggcggcaaagtggtggcgcagagtgtggaagccaacaccagt
accgcctacggcaccatcattaccctgacgatggagtcctccaatactacacagaccaca
gaacctgtttccgaagaacccgcttctgcggcagagtccacttccgcggatacagcccag
agcgacagtcaggcgcaggagtga
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