Subdoligranulum variabile: NQ490_01710
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Entry
NQ490_01710 CDS
T08454
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
svj
Subdoligranulum variabile
Pathway
svj00220
Arginine biosynthesis
svj00240
Pyrimidine metabolism
svj00250
Alanine, aspartate and glutamate metabolism
svj01100
Metabolic pathways
svj01110
Biosynthesis of secondary metabolites
svj01240
Biosynthesis of cofactors
Module
svj_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NQ490_01710 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NQ490_01710 (carB)
00220 Arginine biosynthesis
NQ490_01710 (carB)
Enzymes [BR:
svj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NQ490_01710 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
MGS
ATPgrasp_Ter
ATP-grasp_3
Dala_Dala_lig_C
GARS_A
ATP-grasp_5
ATP-grasp_4
GHMP_kinases_C
Motif
Other DBs
NCBI-ProteinID:
UWP68592
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Position
complement(353592..356828)
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AA seq
1078 aa
AA seq
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MPKDPSIKKVLVIGSGPIIIGQAAEFDYSGTQACRALKSEGVETVLVNSNPATIMTDPDI
ADHVYIEPLTAEVVERIIEKEKPDAILPNLGGQMGLNLSMELARNGFLDRSGVRLLACKP
ETIDRAEDRQLFKDTMEKLHQPIIPSKVVEDLDDALDFAEVIGYPVIVRPAFTMGGTGGG
ICEDREKLHEIATNGLRLSPIHQILVEKCISGWKEIEYEVMRDSKGNVITVCNMENLDPV
GIHTGDSIVVAPSQTLSDKEYQMLRTAALDIITELGIEGGCNCQFALKPDSFEYAVIEVN
PRVSRSSALASKATGYPIAKVATKIALGYTLDEITNDVTGETCACFEPALDYVVVKYPKW
PFDKFVYADKSLGTQMMATGEVMAIGNNFEHAMMKAVSSIELGMDTLTLPDFEKLSTEEV
IEHLHVQDSERAFCVYEALKRGVPHETIYNITKIDWWFLDKMQHLANIELGLQQGELTRE
KYLEAKKYGFLDKTIKRLAKVDTLPEAPKAAFKMVDTCAAEFAAKTPYFYSTYDEDNEAA
QFIAEHSDSKKKKVLVFGSGPIRIGQGIEFDYCSVHAVWTLKNHGCEAILVNNNPETVST
DFDTGDRLYFDPLNPESVDNIIATEKPDGCLVQFGGQTAIKLAKHMDDIGLPILGTPADA
IDEAEDRERFDELLERCGIPRPEGRTVYTLDEALKAAQEVGYPVLMRPSYVLGGQNMIVA
YNSADVIEYMGVITAHVDMSHPVLMDKYIYGTECEVDAICDGTDYLVPGIMEQIERTGVH
SGDSICVYPPYNFSQKVIDTLVDYTGRFARELKVVGLVNVQYAVQDGKVYVIEVNPRSSR
TVPYISKVTGVPMVDLAVRCTLGEKLKDMGYGTGLWRGGKSPYYAVKVPVYSFLKLHGVD
TMLGPEMKSTGEVLGIAPTFHEAMMKGLVAAGYQFKVPGPGSCVIVTVKDSDKKEAAELA
WKLHDYGYKIYGTSETARYLNSQMVPCSVVRQMSGARPNVIDLLESGLVDYIISTSPHGR
DPHRDSVKFRRKATELSIPCITALDTARVLVDALRGDHDISQMELVDIARLHRDAKQD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagatcccagtatcaaaaaggtgctggtcatcggttccggccccatcatcatc
ggtcaggcggcagagtttgactattccggtacccaggcctgccgcgccctcaaatccgaa
ggtgtggagacggtccttgtcaactccaaccctgccaccatcatgactgacccggacatc
gccgatcacgtctatattgaaccgctgacggcggaagtggtggagcgcatcatcgagaag
gagaaacccgatgccatcctgcccaacctgggcggccagatgggtctgaacctttcgatg
gaactggcccgcaacggtttcctggatcgcagtggcgtgcgtctgctggcctgcaagccc
gagaccatcgaccgcgctgaggaccgtcagctcttcaaggataccatggagaagctgcat
cagcctatcatcccctccaaggttgtggaagatctggatgatgcgctggattttgcggaa
gtcatcggctatccggtcatcgtccgcccggccttcaccatgggcggcaccggcggcggc
atctgcgaggaccgggagaagcttcatgagattgctaccaacggtctgcgcctgtctccc
atccaccagatcctggtggagaagtgcatctccggctggaaagagatcgagtacgaggtc
atgcgcgactccaagggcaacgtgatcaccgtctgcaacatggagaacctggaccccgta
ggcatccacaccggtgactccatcgtggtggcccccagccagaccctgtccgacaaggaa
taccagatgctgcgtaccgcggcgctggacatcatcaccgagctgggcatcgagggcggc
tgcaactgccagtttgccctcaagccggacagcttcgagtacgcggtcatcgaggtcaat
ccccgcgtgtcccgttcttcggcgctggcttccaaggctacgggctatcccatcgccaag
gtggccaccaagatcgctctgggttacaccctggacgagatcaccaacgacgtgaccggc
gagacctgcgcctgcttcgaaccggctctggactatgtcgtcgtcaaatatccgaagtgg
cctttcgacaagttcgtctacgccgacaagtccctcggtacccagatgatggccaccggt
gaggtcatggccatcggcaataacttcgagcacgccatgatgaaggcggtttcctccatc
gagctgggtatggacaccctgaccctgcctgattttgagaagctctccaccgaggaagtc
atcgagcatctccatgtgcaggactccgagcgtgccttctgcgtgtacgaggccctcaag
cgcggcgtgccccatgagacgatttacaacatcaccaagatcgactggtggttcctggat
aagatgcagcacctggccaacattgagctgggcctgcaacagggcgagctgacccgggaa
aagtacctggaggccaagaagtacggcttcctggacaagaccattaagcgtctggccaag
gtggatacgctgcccgaagcgccgaaagcggccttcaagatggtggatacctgtgcggca
gagtttgccgccaagacgccctacttctactccacctacgatgaagacaacgaggcggcg
cagttcatcgccgagcacagcgattccaagaagaaaaaggtattggttttcggttccggc
cccatccgcatcggtcagggcatcgagttcgactattgctcggtgcacgccgtctggacg
ctgaaaaaccatggctgtgaggccatcctggtcaacaacaaccccgagacggtttctacc
gacttcgatactggcgaccgcctctactttgacccgctgaaccccgagagtgtggacaat
atcatcgccaccgagaagccggacggctgcctggtacagttcggcggtcagactgccatc
aagctggccaagcacatggatgacatcgggctgcccatcctgggcactccggccgacgcc
atcgatgaggccgaggaccgcgaacgcttcgatgagctgttggagcgctgcggcattccc
cgtcccgagggtcgtaccgtctacaccctggacgaagccctcaaggcggcccaggaggtg
ggctacccggtcctgatgcgtccttcctacgtgctgggcggtcagaatatgatcgtggcc
tacaactctgccgacgtcatcgagtatatgggcgtcatcacggcccatgtggatatgagc
cacccggtgctgatggataaatatatctatggcaccgagtgtgaggtggatgccatctgt
gacggtaccgattacctggtacccggcatcatggagcagatcgaacgtaccggcgtgcat
tccggcgactccatctgtgtctatccgccctacaacttcagccagaaggtcatcgacact
ctggtagattacaccggccgctttgcccgcgaactgaaggtcgtgggtctggtgaacgtc
cagtatgcggtccaggacggcaaggtgtatgtcatcgaggtcaacccccgttccagccgt
accgtgccgtatatcagcaaggtcaccggcgtaccgatggtggacctggccgtgcgctgc
accctgggcgaaaagctcaaggatatgggctatggcaccggcctgtggcgcggcggcaag
agcccctactatgccgtcaaagtgccggtatacagcttcctgaagctgcacggcgtggac
accatgctcggccccgaaatgaagtccaccggcgaggtgctgggcattgcccccaccttc
cacgaggcgatgatgaagggccttgtggcggctggttaccagttcaaggtgccggggccc
ggttcctgcgtcattgtcacggtcaaggacagcgacaagaaggaagccgccgagctggcc
tggaagctgcatgactacggctacaagatttacggtacgtctgagacggcccggtatctc
aacagccagatggtgccctgcagcgtggtgcgtcagatgagcggtgcccgtcccaatgtc
atcgacctgctggaaagcggcctggtggattacatcatttccacaagcccgcacggccgt
gacccgcaccgcgactcggtcaagttccgccgcaaggccacggagctgtccatcccgtgc
attacggcgctggacaccgcccgtgtgctggtggatgcgctgcgcggcgatcacgatatc
agccagatggaactggtggatatcgcccggctgcatcgcgacgccaaacaggattga
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