Subdoligranulum variabile: NQ490_02570
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Entry
NQ490_02570 CDS
T08454
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
svj
Subdoligranulum variabile
Pathway
svj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQ490_02570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svj03021
]
NQ490_02570
03400 DNA repair and recombination proteins [BR:
svj03400
]
NQ490_02570
Enzymes [BR:
svj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQ490_02570
Transcription machinery [BR:
svj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQ490_02570
DNA repair and recombination proteins [BR:
svj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQ490_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
RAD51D_N
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UWP68752
LinkDB
All DBs
Position
complement(513894..514853)
Genome browser
AA seq
319 aa
AA seq
DB search
MMEIERPKIETASLSPDGRYGKFVVEPLERGFGTTLGNSLRRVLLSSLPGVAVTSVKIDG
VVHEFSTIEGVREDVTEIVLNLKGIAAKIYGESPKTVRVEAVGPCELIAGSIKGGDDLEI
LNPEWHIATLGEGAKLVMELTFDKGRGYVPAERNKLALIEKNDISTLPVDSIYTPVLKAN
YTVDHTRVGQITDYDKLIIEVWTDGTCNAQEALSLAARVLTEHLNLFVNLCDETGETEIM
VDNDDQGREKALEMTIEELDLSVRSFNCLKRAGINTVGDLINKSEDEMMKVRNLGRKSLE
EVMAKLDSLGFSLTKDDEN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatggagatcgaacgccccaagatcgaaacggccagcctttccccggatggtcgctac
ggtaagttcgtcgtcgagccgctggagcgcggtttcggcacgaccttgggcaacagcttg
cgtcgtgtgcttctgtcctctctgcccggtgtggctgtcaccagcgtcaagatcgacggc
gtggtgcatgagttttccaccatcgagggtgtacgtgaggacgtgaccgagatcgtcctg
aacctgaagggcatcgccgccaagatctacggcgaaagccccaagaccgtccgtgtagag
gccgttggtccttgtgaactcattgccggctccatcaagggcggcgatgacctggagatc
ctcaaccccgagtggcacatcgccaccctgggcgagggtgccaagctggtcatggaactg
acctttgacaaaggccgcggctatgtccccgccgagcgcaacaaactggcgctgatcgag
aaaaacgacatcagcaccctgcccgtcgacagcatctatacccccgtgctcaaagccaac
tacactgtggatcacacccgtgtaggccagatcaccgactatgacaagctcatcatcgag
gtctggacggacggcacctgcaatgcgcaggaagccctgagcctggcggcccgcgtgctg
accgagcatctgaacctgtttgtgaacctctgcgacgagaccggcgagaccgagatcatg
gtcgataacgacgatcagggccgtgagaaggcgctggagatgacgattgaagagctggat
ctgagcgtccgttccttcaactgcctgaagcgcgccggcatcaacacggtgggcgacctc
atcaacaagagcgaagacgaaatgatgaaggttcgcaatctgggccgcaagagcctggag
gaagtcatggccaagctggacagccttggtttctctctgaccaaggacgacgaaaactaa
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