Subdoligranulum variabile: NQ490_03480
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Entry
NQ490_03480 CDS
T08454
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
Organism
svj
Subdoligranulum variabile
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PQQ
Motif
Other DBs
NCBI-ProteinID:
UWP68923
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Position
674338..676128
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AA seq
596 aa
AA seq
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MARRGADRPNGRGRVAVLLVVCCAVFVLFFARLAWMQFAMADHYAEKAAEASSASYTVEQ
HAARGAITDRNGTVLARDTTVYDVYLRVPAPPGTDLTETVQTLQALTGGKDVETQLAAFC
SAVSAGELLVLESVDDETMAALYRSGLVQSGAIRLAARGERSWPDGTLLPHALGFTGPIT
AEEWPSAQEKGLAMDSIVGQSGLEEAYDDLLRGQDGQLLINTGLDGAVRATIQQRTATPG
ATLVLTLDASLQATLQQALRERIETLQTTAFAGGGRECRAGAAVVVDVKTGGILAAANWP
GYDLNTYRTDYAALSADPGAPLLDRAFQGLYAPGSAFKPAVAAAALTAGIDPNATVNCTG
RYLYYSGYQPGCLQYGHSGPVDMRTALEQSCNIFFYDVGRRLGVDTFSSMARQLGLSQPT
GVEVREAEGRLTWSTDDNYQAGLTLMAAIGQGNTAVTPAQLAVYAATLATNGQRPTLHFA
DRALNTATGETVWQYEPQFTTVPSGETVFGPIRDGMKRMAQTNRYLREASVVCAAKTGSP
QLADTLPNGTHYVNSVLIGYAPADDPQIAVAVVLEYGGGGSNATPILRAVLDAWFD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggccagacgaggggcagaccgtccgaatggacgcgggcgggtcgccgtactgctggta
gtttgctgtgcggtctttgtgctcttttttgcgcggctggcctggatgcagtttgccatg
gctgaccattacgccgaaaaagcagccgaagccagttcggccagctacacggtggagcag
cacgctgcccggggcgccatcaccgaccgcaacggcacggttctggcccgggacaccacc
gtctatgatgtctatctgcgggtcccggcaccaccgggcaccgatttaacggaaaccgta
caaacgctgcaggcccttacaggcggcaaggatgtggaaacacaacttgccgccttttgt
tctgccgtttcggcgggagagctgctggtgctggagtcggtggacgacgagaccatggcc
gccctgtaccgctccgggctggtccagagcggggccatccggctggccgcccggggagag
cgaagctggccggacggcacgctgctgccccacgccctgggctttacaggaccgatcacg
gcggaagaatggccctccgcccaggaaaaaggccttgccatggacagcatcgtaggccag
agcggactggaggaagcctacgacgatctgctccgcgggcaggacgggcagctgctcatc
aacaccggactggatggtgccgtgcgggccacgatccagcagcgcaccgccacaccgggc
gccacactggtgctgacgctggacgcttccctgcaggcaacgctgcagcaggccctgcgg
gagcgcatcgaaacgctgcagaccaccgcctttgccggcggcgggcgggaatgccgtgcc
ggggcggcggtggtcgtggatgtgaagaccggcggtattctggcggccgccaactggccg
ggctatgatctgaacacctaccgcaccgactacgcagcgctgtccgccgacccgggggct
ccgctgctggaccgagccttccaggggctgtacgcaccgggatctgccttcaagcccgcg
gtcgccgctgcggccctcaccgccgggatcgaccccaacgccaccgtcaactgtacaggg
cggtacctctattacagcggctatcagcccgggtgtctgcagtatggacactccgggccg
gtggatatgcgcaccgccctggaacagagctgcaatatctttttctacgacgtgggacgg
cggctgggggtggacaccttcagctccatggcccggcagctggggctttcccagcccacc
ggggtggaagtccgggaagcggaaggccgcctgacttggtccaccgacgacaactatcag
gctggactcaccctgatggctgccatcggccaaggcaacaccgccgtcacccccgcccag
ctggcggtctacgccgccacgctggccaccaacgggcagcggcccaccctgcattttgcc
gaccgggccctcaacaccgccaccggagagaccgtctggcaatacgagccgcagttcaca
acggtgcccagcggcgaaaccgtattcggccccatccgggacggcatgaagcggatggcc
cagaccaaccggtatctgcgggaagcatcggtggtctgcgccgccaagaccggcagtccc
cagctggccgacaccctgcccaacggcacccactacgtcaactcggtgctcatcggctat
gcgcccgccgatgatccgcagatcgcggtggccgttgtgttggaatacggcggcggcggt
tccaacgccacgcccatcctgcgggccgtactggatgcctggtttgactga
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