Subdoligranulum variabile: NQ490_03520
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Entry
NQ490_03520 CDS
T08454
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
svj
Subdoligranulum variabile
Pathway
svj00300
Lysine biosynthesis
svj00470
D-Amino acid metabolism
svj01100
Metabolic pathways
svj01110
Biosynthesis of secondary metabolites
svj01120
Microbial metabolism in diverse environments
svj01230
Biosynthesis of amino acids
Module
svj_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NQ490_03520 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NQ490_03520 (dapF)
Enzymes [BR:
svj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NQ490_03520 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UWP68930
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Position
complement(682334..683182)
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AA seq
282 aa
AA seq
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MKLEFTKMQGAGNDYIYLDCRHSGVPADAAQWAALLSRRRFSVGADGLICIAPPQLSDGD
ATMVMFNADGSEGAMCGNGIRCVAEYLYTHGVQKELIELDTRQAGRKTLYRVGEHRWRAG
MGRFSTRAADLPAVGLGAGPLLEVPLVAAGQSWQVSCVSMGNPHCVVFCNEAPPAGVQLA
DWGAAVENHPAFPQGINVEFVQAESPTSLTTTVWERGSGATLACGTGACAAAVVGVLRGI
CPRETPIDVRLPGGTLTVRVLQDDTVLLTGPAETVFDGYVEV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggaatttaccaagatgcagggggccggcaacgactatatttatctggactgc
cggcacagtggtgtgccggccgatgcggcacagtgggcggcgctgctgtcccggcggcgg
ttctcggtgggggcggacggcctgatctgcattgcgccgccgcagctgtcggatggagat
gccaccatggtgatgttcaacgccgacggcagtgagggggcgatgtgcggcaacgggatc
cgctgtgtggcggagtacctctatacccacggggtacagaaggagctgatcgaactggat
acccggcaggccggacggaaaacgctctaccgagtgggagaacatcggtggcgggccggc
atggggcggttttccacccgggctgcggatctgccggccgtaggtctgggcgcgggcccc
ttgctggaggtgcccctggtggccgcggggcagtcctggcaggtcagctgcgtcagcatg
ggcaatcctcactgtgtggtattctgcaatgaggcgccgcctgccggtgtgcagctggct
gactggggagcggctgtggaaaatcatccggcttttccgcagggaatcaatgtggaattt
gtacaggcagagagtcccacctcgctaacaaccacggtctgggagcggggaagcggggca
acgctggcctgcggtacaggggcctgcgccgcggcggtggttggcgtattgcgcggcatt
tgcccacgggaaacgcccatagacgtgcgcctgccgggcggtacgcttacggtccgggtc
ctgcaggatgatacggtgctgctcaccggcccggcggaaacggtgtttgacggttatgtt
gaggtatag
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