Subdoligranulum variabile: NQ490_05115
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Entry
NQ490_05115 CDS
T08454
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
svj
Subdoligranulum variabile
Pathway
svj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NQ490_05115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svj02000
]
NQ490_05115
Transporters [BR:
svj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NQ490_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA
AAA_16
SMC_N
AAA_30
AAA_21
ABC_membrane_3
TsaE
AAA_24
DUF87
nSTAND3
AAA_18
ATP-synt_ab
DO-GTPase2
AAA_14
AAA_7
AAA_23
NTPase_1
Zeta_toxin
WS_DGAT_C
ABC_membrane_2
AAA_28
AAA_29
ATP_bind_1
AAA_5
MobB
Motif
Other DBs
NCBI-ProteinID:
UWP69235
LinkDB
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Position
complement(1036805..1038616)
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AA seq
603 aa
AA seq
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MPRPGRMTTERAKDFKGTLRQLLRALNRYKISMAVVVVFAILSTIFNIAGPKVLAKATTA
LATGWVAKLRGTGGIDFGYIGRILLILLGMYLLSSAFSFIQSWLMSGLSQKVCYDFRRQI
SEKINRLPLAYFEKRTVGEVLSRITNDVDTLGQSLNQSITQLITSVTTMIGVLIMMLSIS
ARMTLIALLILPVSLVLVMVVVHFSQRFFKAQQATLGVVNGQVEEVYSGHNVIKAFNREQ
AVLDDFNAANDQLYASAWKSQFLSGLMMPIMNFVGNLGYVAVAIVGSIFAAGGIITIGDI
QAFIQYVKNFTQPIQQLSQVSNMLQSMAAAAERVFEFLAEEEEDQTADPARRADPATIDG
QVTFDHVKFGYTPDKTVIRDFSCTVQPGQKVAIVGPTGAGKTTMVKLLMRFYDVDGGSIT
LNGHNVRDFDRSALREGFGMVLQDTWLFQGTIMENIRYGRLDATDEEVIAAAKAAGADHF
IRTLPGGYQMELNEDASNVSQGQKQLLTIARAILADNRILVLDEATSSVDTRTEQRIQAA
MDHLMQGRTSFIIAHRLSTIRNADLILVMRDGDIVEQGNHDQLMEAGGFYADLYNSQFED
VTA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccaagacccggacggatgaccaccgaacgcgccaaggacttcaagggcacgctgcgt
cagctgctgcgcgctctgaaccgctataaaatttccatggccgtggtcgtggtgtttgcc
atcctctctaccatcttcaatatcgcgggacccaaggtgctggccaaagccaccaccgcc
ctggccaccggctgggtggccaaactgcggggcaccggcggcatcgatttcggctatatc
ggccgcattctgctgatcctgctgggtatgtacctgctctcctcggccttcagttttatc
cagagctggctcatgagcggcctttcccagaaagtctgctacgatttccgccgccagatc
agcgaaaagatcaaccgcctgcccctggcctactttgaaaagcgcacggtgggcgaggtg
ctctcccgcatcaccaacgatgtggataccctgggtcagagcctgaaccagagcatcacc
cagctgatcaccagcgtcaccacgatgatcggcgtgctgatcatgatgctctccatcagt
gcccggatgaccctcatcgccctgctgatcctgccggtgtccctggtgctggtcatggtt
gtggtccatttcagccagcgcttcttcaaggcccagcaggccaccctgggcgtcgtcaac
ggccaggtggaggaggtctactccggccacaatgtcatcaaggcgttcaaccgggaacag
gccgttctggacgacttcaacgccgctaacgaccagctctatgcctccgcctggaagagc
cagttcctctccggcctcatgatgcccatcatgaactttgtgggcaacctgggctatgtg
gcggtggccatcgtgggcagcatctttgccgccggcggcatcatcaccatcggcgacatc
caggccttcatccagtatgtgaaaaactttacccagcccatccagcagctgtcccaggtg
tccaacatgctccagagcatggcggccgccgccgagcgcgtctttgagttcctggccgaa
gaggaggaggaccagaccgccgatccggcccgccgcgccgatccggccaccatcgacggc
caggtcaccttcgaccatgtgaaattcggctatacccccgacaagacagtcatccgcgac
ttcagctgtacggtgcagcccggccagaaggtggccatcgtcggccccaccggcgccggc
aagaccacaatggtcaagctgctcatgcggttctacgatgtggacggcggttccatcacg
ctgaacggccacaacgtccgggactttgaccgcagtgccctgcgggaaggcttcggcatg
gtgctgcaggatacctggctgttccagggcaccatcatggagaacatccgctacgggcgc
ctcgacgccaccgacgaggaggtcatcgctgcggccaaggcggcgggcgccgaccacttc
atccgcacgctgcccggcggctaccagatggaactgaacgaggacgcctccaacgtgagc
cagggccagaaacagctgctgaccatcgcccgggcgattctggcggacaaccgcatcctg
gtgctggacgaagccaccagcagcgtggatacccgcaccgagcagcgcatccaggcggct
atggaccacctgatgcagggccgtaccagcttcatcatcgcccatcggctgtccaccatc
cgcaacgccgatctgatcctcgtcatgcgggacggcgacattgtggaacagggcaaccac
gaccagctgatggaggcgggcggcttctacgccgacctgtacaacagccagtttgaggac
gtgacagcgtga
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