Subdoligranulum variabile: NQ490_05120
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Entry
NQ490_05120 CDS
T08454
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
svj
Subdoligranulum variabile
Pathway
svj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NQ490_05120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svj02000
]
NQ490_05120
Transporters [BR:
svj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NQ490_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_23
AAA_29
SnoaL_2
MMR_HSR1
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UWP69236
LinkDB
All DBs
Position
complement(1038618..1040837)
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AA seq
739 aa
AA seq
DB search
MGKIFKQLGRHWAACLLVFALLAVQAYCDLSLPDYTSKIVDVGIQQGGIESTVPHTVRDT
TLQALELLMSEQDAGLAEQWYSEPDENGVRTLAHDATAALPELENAFTTPDIVLYMAAAQ
HAATVQGTEGTATPAWTDLDAVATEFAMMAQAPGFSREAVQQQLAGAMASVDDSVAESLS
SQAMLLVSLEYEAQGIAHDVQMAYLWRVGGQMLALTLLMVVVAIAVGFVASRVSAAIGRD
LRRDTFSAVIHFSHAEIEQFSTASLITRTTNDIQQVQFVCVILLRMVAYAPILGIGGIVH
VARSDTGLTWITFLAVAALLILIGVLMKIAMPKFKLMQTLVDRLNLVSREILTGIMPVRA
FSREKFEEQRFDKANRNLMQTQLFTNRTMAGMMPFMTLIMNGTSLLIVWFGGKAMDLGTM
QVGEMIAFITYTMQIVMSFLMLAMVAVLLPRAGVAADRIDEVLRTPATIHDPTPEVAEKA
ASRTHWDGVVQFEDVSFRYPGADDDALEHISFTARPGETTAIIGSTGCGKSTLLNLIPRF
YDVTGGRVTIDGVDVRDLPQQTLHDLLGYVPQKGVLFSGTIESNLKFGGPRITDGDVQQA
AAIAQATDFIEAKPEGFRSPIAQGGSNVSGGQKQRLSIARAIAKHPRIYLFDDSFSALDY
KTDVALRRALKAQTDNATVLIVAQRISTVLHANQILVLDEGKVVGIGTHAQLLESCPEYR
EIARSQLSQKELGLPKEDD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagatctttaaacagctgggccgtcactgggcggcctgtttattggtgtttgcc
ctgctggcggtgcaggcctactgtgacctgtccctgcccgactacaccagcaagatcgtg
gacgtaggcattcagcagggcggcatcgagagcacggtgccccacacggtgcgggacacc
acgctccaggcgctggaactgctcatgagtgagcaggatgccgggctggccgagcagtgg
tactcggaacccgacgaaaacggcgtgcgtaccctggctcatgacgccacggcggctctg
ccggaactggagaacgccttcaccacgccggatatcgtgctgtatatggcggctgcccag
cacgcggccacagtccaggggacggagggcaccgccacgccggcctggaccgatctggat
gccgtggccactgagtttgccatgatggcccaggcaccgggcttcagccgggaggcggtc
cagcagcagctggccggggcaatggcttcggtggacgattcggtggcggaaagcctgtcc
agccaggccatgctgctggtaagcctggaatatgaggcccagggcatcgcccacgatgta
cagatggcctacctctggcgggtgggcggtcagatgctggccctgaccctgcttatggtg
gtggtcgccatcgcggtgggctttgtggcctcccgggtgtcggcggccatcggccgtgac
ctgcggcgggacaccttctccgccgtcatccatttctcccatgcggagatcgagcagttc
tccacggcgtcgctgatcacccgcaccaccaacgatatccagcaggtgcagttcgtctgc
gtcatcctgctgcggatggtggcctacgcgcccattctgggcatcggcggcatcgtccat
gtggcccgcagcgatacggggcttacctggatcaccttcctggcggtggcggcgctgctg
atcctcatcggcgtgctgatgaagatcgccatgcccaagttcaaactcatgcagaccctg
gtggaccggctgaacctggtcagccgggagatcctcaccggcatcatgccggtgcgcgct
ttcagccgggaaaagtttgaggagcagcggttcgacaaggccaacaggaacctcatgcag
acccagctcttcaccaaccgtaccatggccggcatgatgcccttcatgacgctgatcatg
aacggcaccagcctgctcattgtctggtttggcggcaaggctatggatctgggtaccatg
caggtgggcgagatgatcgccttcatcacctataccatgcagatcgtcatgtccttcctg
atgctggccatggtggcggtgctgctgccccgtgccggagtggcggccgaccgcatcgac
gaggtgctgcgcaccccggccaccatccatgaccccacgccggaagtggccgaaaaggcg
gcatcccgcacccattgggacggcgtggtgcagtttgaggatgtgagtttccgctatccc
ggcgccgatgatgacgccctggagcacatcagtttcaccgcccgccccggcgagaccacc
gccatcatcggttcgacgggctgcggcaaatccaccctgctgaacctgatcccccggttc
tacgatgtaacggggggccgggtgaccatcgacggggtggacgtgcgggatctgccccag
cagacccttcatgacctgctgggctatgtgccccagaagggcgtgctgttcagcggcacc
atcgaatccaacctgaaatttggcggcccccggatcaccgacggcgacgtgcagcaggct
gccgccatcgcccaggccaccgacttcatcgaagccaagcccgagggcttccggagcccc
atcgcccagggcggcagcaatgtgtcgggcggccagaagcagcggctttccatcgcccgg
gccatcgccaagcacccccgcatctatctctttgacgacagcttctcggccctggactac
aagaccgacgtggctctgcgccgtgccctcaaggcacagaccgacaacgccaccgtgctc
attgtggcccagcgtatctccacggtgctgcacgccaaccagatcctcgttctggacgag
ggcaaagtggtgggcatcggcacccacgcccagctgctggaaagctgccccgaataccgg
gagatcgcccgcagccagctgagccagaaagaactgggcttaccgaaggaggatgattga
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