Subdoligranulum variabile: NQ490_06845
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Entry
NQ490_06845 CDS
T08454
Name
(GenBank) DEAD/DEAH box helicase
Organism
svj
Subdoligranulum variabile
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Motif
Other DBs
NCBI-ProteinID:
UWP69559
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Position
complement(1414689..1417124)
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AA seq
811 aa
AA seq
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MPDLMIAFSAAVSRKNGFIVLETYYTKQIGVSKAGKYKGGSITAADVLNCLPIQNASRDV
VQKWFAEFAYQIGKNSFYVTVENFRKLHHLLASSPMIFLDHADASLTLISKIEEKPGRKR
AKQQYSIGNCLFSCFSDGTLCIENRPGAASHIQALCPKPHLSYSTTDQAYSLLFEYGGEK
AAYMDKGLSVKTEDGIYLRNFQYESRTGQELQEKGFLKLTKGRYAYSGRRDRSALHTMLS
EMGIILDDDKSTIIPNIKITRRESGWFEVDLSYNIGDRIINLASQIQLFAQKNEMEVGDK
RIVLPDSVIQAKDDFVVKGNKLYLHQKHIFQLLRLIYNSGSSITDFFPYADVKPALPEPV
DKMALPYQREGIQWLKFLFLNHLGGCLADDMGLGKTFQVIAFLEDNDVKKHLQKVLIVVP
KSLLTNWKREFEKFCSNYRVGIYHGNKRSELDFGKCDVIITTYNTALLDKEYLDHKGFTI
VVLDEIQTVKNYKSITSQAIKEIHAEMKIGLSGTPMENGISELWNVMDIVNPGAFPGHSA
FLHRYHDRNYDELKEILNLFILRRMKKDVLKQLPPKYEQIIYCDMDIAQRRLYTGINIAV
KSAISRLKIFAAPVVLKGLTLLRECCCHPLLLDDTINVEGVVDSCKLDALKILVADLFES
GHKILIFSNYTSMLHLIRQELEKRSEYKANLFYLDGKTQQRNLLVEQFEKASAGIFLISI
KAGGVGLNLTSAQDVIIYDPWWNPFVEQQAIDRAYRIGQQQAVNVYKLVAANTIEEKILD
MQKDKEQDFEELINGISTDKNIDLNKILSLL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccggacttgatgatcgccttcagcgcagccgtttccagaaaaaacggctttattgtc
ttggaaacatactataccaaacagattggtgtaagtaaggctggaaaatataaggggggc
agtattacagctgcggatgtgctgaactgccttcctattcaaaatgcttcacgggatgtt
gtgcagaaatggtttgcggagtttgcctatcagattggtaaaaacagcttttatgttacg
gtagaaaactttcgaaagctgcatcaccttttggcatccagcccgatgatctttctggat
catgcagatgcttcgcttacgctcatcagcaagatagaggaaaaaccaggccgtaaacgg
gctaaacagcaatactctatcggcaactgccttttctcttgtttttcggatggcacactg
tgtatagaaaataggcccggtgccgcttcccatatccaagccctttgtccgaagccccat
ctttcctattcaaccaccgaccaagcgtattcgctcctttttgaatatggcggtgaaaag
gcagcctatatggataaggggctttcggttaagactgaagatggaatttacctgcgaaat
ttccagtatgaaagcagaactggacaagaacttcaggaaaaagggttcctgaaactgaca
aagggtaggtatgcgtattccgggcgtagggatagatctgcactgcataccatgttgtct
gaaatgggaatcatcctggacgatgacaaaagtaccattattccgaatatcaaaattacc
cggcgggaatccggttggtttgaggtggatctaagttataacattggagatagaatcatt
aacttggcttcccaaatacagttgttcgcgcaaaaaaatgagatggaagttggtgataag
cgaattgttttgccggattctgtaatacaggcaaaagacgattttgttgtaaagggtaac
aagctttatctccaccagaaacacatttttcaactgttgcgcctgatttataacagcggc
tcgtcaatcacggacttttttccctatgcggatgtgaaaccggccttgccggaacccgtg
gataagatggcgctgccctaccaacgggaaggaattcaatggctcaagtttttgttttta
aaccatcttggcggttgtctggcggatgacatgggcctcggcaagacatttcaggttatc
gcatttttagaagataatgatgtcaaaaaacaccttcaaaaggttttgattgtcgttcct
aaatctctgctcacaaactggaaaagagaatttgaaaaattctgttccaactaccgggtt
ggtatctatcacggaaataaacgcagcgaattggatttcggcaagtgtgatgttattatt
acaacatacaataccgcacttctggataaagagtatctggatcacaaggggtttaccatt
gtcgttttggacgaaattcaaacagtaaaaaactacaaaagcattacctcccaggcgatc
aaagaaatccacgcagagatgaaaatcggattatccggtacccccatggaaaatggcatt
tccgaactttggaatgttatggatattgtgaatccgggggcatttcctggtcattctgct
tttttgcatcggtatcacgaccgcaactatgacgaattaaaggaaattttgaatctgttt
atccttcgccgtatgaagaaagatgtactgaagcaacttccgcccaagtacgaacagatt
atttactgcgatatggatatagcacaaagaaggctttatacaggtatcaatattgccgta
aaatcggcgatctcccgcctgaaaatttttgcggccccagttgttttaaagggactcaca
ttgttacgggaatgctgttgccacccgcttttgctcgacgataccattaatgtggaaggc
gttgtggattcctgcaagctggacgcgttaaagattctggtggcggatctgtttgaatcc
gggcacaaaattttgattttcagcaattacacttccatgctgcatctgatccggcaagaa
ctggaaaaacgcagtgaatataaagcaaacctcttttatctggacgggaaaacgcaacaa
cgcaatcttttggtggagcaatttgagaaagcaagcgcaggcatttttttgattagtatt
aaagcaggcggggttgggctaaatctgacatctgcgcaggatgtgatcatttatgatccc
tggtggaatccgtttgtagagcagcaagcaatcgacagagcttatcgtatcgggcaacag
caagcggtcaatgtctataaacttgtggctgccaacacgattgaagaaaaaattcttgat
atgcagaaagataaagaacaggactttgaagaattgatcaatggaatctccaccgataag
aacatagacctaaacaaaattctaagcctgttgtaa
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