Subdoligranulum variabile: NQ490_10550
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Entry
NQ490_10550 CDS
T08454
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
svj
Subdoligranulum variabile
Pathway
svj03030
DNA replication
svj03410
Base excision repair
svj03420
Nucleotide excision repair
svj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ490_10550 (polA)
03410 Base excision repair
NQ490_10550 (polA)
03420 Nucleotide excision repair
NQ490_10550 (polA)
03440 Homologous recombination
NQ490_10550 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svj03032
]
NQ490_10550 (polA)
03400 DNA repair and recombination proteins [BR:
svj03400
]
NQ490_10550 (polA)
Enzymes [BR:
svj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ490_10550 (polA)
DNA replication proteins [BR:
svj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NQ490_10550 (polA)
DNA repair and recombination proteins [BR:
svj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NQ490_10550 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ490_10550 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UWP67378
LinkDB
All DBs
Position
complement(2263207..2265720)
Genome browser
AA seq
837 aa
AA seq
DB search
MKLMVLDGNSLVNRAFFGIKLLTTKDGRYTNAIFGFQNILLNLLSAHQPDAVAIAWDERA
PTFRHKAYDGYKATRHGMPEELAQQMPVLKELLKDLGFVQVSKEGWEADDILGTLAAACE
AQGGTTLLATGDRDSLQLVDDATTVLLATNKETIPMDPAAIQEKYGVTPAQLIDVKSLMG
DSSDNIPGVPGIGEKTALALVQKFGSLQSIYDHLEDPAIKPGQRTKLGANRDKAELSYML
GTIRKDAPIDTDPAAYTRRPGDPTAAAHLLAGLEMHKLIDRWQLETGSTPAAAESAAPLE
AVEPSPLPLVVEGRLYLAQNADGSWYAVQDGQVFLPGTDRLAALLDSDADLWVFDAKPLY
HLALDRGGIGKAIHFDGKLAAYLLNPSASGYAVKNLAGEYDVPAAFTCEAAPDAGVLAAL
LDKLAAALDESGQRKLHDEMELPLARVLADMERIGFAVDADGIRAFGDSLRGELDGILQS
IYEEVGYEFNVNSPKQLGEALFDKLGLPPRKKTSRGYSTDAATLESLRPYSPVIDQILKY
RTYAKLLSTYVEGLLSAQAADGRVHSTFIQTEARTGRISSTEPNLQNIPIRTELGSRLRG
FFVAGAGKELVDADYSQIELRILAHITGDEAMQQAFLHGADIHRSTAAKIYHIPESEVTP
QLRSASKAINFGIMYGKGAFSLSKDLDVSVKEADAFLKTYLATFPKVDGYMQDCIAHAKE
KGYVETLFGRRRALPELASSNFQVRASGERMARNTPIQGTAADIIKLAMVHVWQRLRDEK
LEARLLLQVHDELIVEAPEAEVEEVKRVLREEMEQVVQYSVPLTTDVGTGKTWLEAH
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatggtactggacggcaacagtctggtcaaccgggccttcttcggcatcaaa
ctgctgacgaccaaggacggccgctacaccaacgcgatcttcggattccagaacattctg
ctcaacctgctcagcgcccaccagcccgatgcggtggccatcgcctgggatgagcgggcc
cccaccttccgccacaaagcctacgacggctacaaggccacccgccacggcatgccggag
gagctggcccagcagatgccggtactgaaggaactgctgaaggatctgggctttgtgcag
gtgagcaaggagggctgggaggccgacgacatcctcggcaccctggccgccgcctgcgag
gcacagggcggcaccaccctgctggccaccggcgaccgggacagcctgcagctggtggac
gacgccaccacggtactgctggcgacaaacaaggagaccatccccatggatcccgccgcc
atccaggagaaatacggcgtcaccccggcccagctcatcgacgtgaagagcctgatgggc
gattcgtcggacaacatccccggtgtgccgggcatcggcgagaaaaccgccctggctctg
gtccagaagttcggcagtctgcaatccatttatgaccatctggaagaccccgccatcaag
cccgggcagcgcaccaagctgggcgccaaccgggacaaggcggagctctcctatatgctg
ggcaccatccgcaaggacgcccccatcgacaccgatcccgccgcttacacccgccgtccc
ggcgacccgacggccgctgcccatctgctggccggtctcgagatgcacaagctcatcgac
cgctggcagctggaaactggcagcacccccgccgcggcggaatcggcggcacctttggaa
gcggtggaaccttctcccctgccgctggtggtggaaggccggctctacctggcccagaac
gccgatggcagctggtatgccgtgcaggacggacaggtttttctgcccggcaccgaccgg
ctggccgccctgctggacagcgacgcggacctctgggtcttcgatgcgaaaccgctctac
cacctggcactggaccgcggcggcatcggcaaggccatccattttgacggcaagctggcg
gcctatctgctgaacccgtcggccagcggctatgccgtgaaaaatctggccggggaatac
gatgtacccgccgcctttacctgtgaagccgcccccgacgccggggtactggcggccctg
ctggacaagctggccgccgccctggacgagagcgggcagcgcaaactccacgatgagatg
gagctgcccctggcccgggtgctggcggatatggaacgcatcggctttgcggtggacgcc
gacggcatccgcgctttcggcgacagcctgcgaggcgagctggacggcatcctgcagagc
atctacgaggaagtaggctacgaattcaacgtaaacagccccaaacagctgggcgaggct
ctctttgacaagctgggcctgccgccgcggaaaaagacttcccgcggttattccaccgac
gccgccaccctggagagcctgcgcccctacagtccggtcatcgaccagatcctgaaatac
cgcacctacgccaagctgctctccacctacgtggaagggctgctctccgcccaggccgcc
gatggccgggtgcattccaccttcatccagaccgaagcccgcaccgggcggatctcctcc
accgagcccaacctgcagaacatccccatccgcaccgaactgggcagccgtctgcggggc
ttcttcgtggccggggctggcaaggaactggtggacgccgactactcccagatcgagctg
cgcattctcgcccacatcaccggcgacgaggccatgcagcaggcgttcctgcacggggcg
gacatccaccgctccaccgccgccaagatctaccacattccggagagtgaggtcacaccc
cagctgcgctccgccagcaaggccatcaacttcggcatcatgtacggcaagggggccttc
tccttgagcaaggacctggatgtatcggtgaaggaagccgacgctttcctgaaaacctat
ctagccaccttccccaaggtggatggctatatgcaggactgcatcgctcacgccaaggaa
aaaggctatgtggaaacgctgttcggacgccgccgggccttgccggaactggcaagttcc
aatttccaggtgcgggccagcggcgaacggatggcccggaacacccccatccagggcacc
gcggccgacatcatcaagctggccatggtccatgtgtggcagcggctgcgggacgaaaag
ctggaagcccggctgctcttgcaggtccacgacgaactgatcgtggaagcccccgaggcc
gaggtggaggaagtcaagcgcgtgctgcgcgaggaaatggaacaggtcgtgcagtacagc
gtaccgctgaccaccgacgtgggcaccggcaagacctggctggaagcacattga
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