Subdoligranulum variabile: NQ490_11870
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Entry
NQ490_11870 CDS
T08454
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
svj
Subdoligranulum variabile
Pathway
svj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NQ490_11870 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svj01007
]
NQ490_11870 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svj03016
]
NQ490_11870 (aspS)
03029 Mitochondrial biogenesis [BR:
svj03029
]
NQ490_11870 (aspS)
Enzymes [BR:
svj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
NQ490_11870 (aspS)
Amino acid related enzymes [BR:
svj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NQ490_11870 (aspS)
Transfer RNA biogenesis [BR:
svj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NQ490_11870 (aspS)
Prokaryotic type
Other AARSs
NQ490_11870 (aspS)
Mitochondrial biogenesis [BR:
svj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NQ490_11870 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UWP67630
LinkDB
All DBs
Position
2528950..2530737
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AA seq
595 aa
AA seq
DB search
METLGNLRRTRYCGEVSLADAGQEMTVCGSIARARDKGGIIFADLRDTTGILQLVFDEDT
PKEVFAKAESLKSEYVVICRGKLRERASKTDKIATGDVELYVSELRVLSEAQTPPFEIRD
EINVNDDLRLRYRYLDLRRPSMHEPIVLRSKIMQIIRSYFTDNHFTEIETPTLIKSTPEG
ARDYLVPSRVQPGHFYALPQSPQLYKQILMLSGFDRYFQIARCYRDEDLRADRQPEFTQV
DEEMSFVTEDDIMTVNEGLLKRLWKEMLGIDLVTPFERMPWNDAMSRFGSDKPDTRFGLE
IQDVTSVFANTEFKPFAAVIEAKGTIRAINAKGLADKLSRKNIDKLGEVAKTYGAKGLAY
SRLTADGTSSSFEKFLTEEEKTALYAALGAETGDVLLLVSDADWVKACTALGQVRLDIAR
KHDLIDNDKFNFLWVVDFPLFEYSEQEGRWMAMHHPFTMPKAEDLDKIESDPGACHAVAY
DIVLNGVELGGGSMRINDPALQDRMFKALGFTEEKARASFGFLMDAYKFGAPPHGGMAYG
LDRMVMLMLKKDSIRDVIAFPKVQNAGEPMSGAPDVVDEKQLADLSIALTLPEKE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttgggcaacctgcgccgtacccgttattgcggggaggtcagcctggccgac
gccggccaggagatgaccgtctgcggctccatcgcccgtgcccgcgataagggcggcatc
atctttgccgacctgcgcgataccaccggcattctgcagctggtgttcgatgaggatacg
ccgaaagaggtcttcgccaaggcggagagcctcaagagcgagtatgtggtgatctgccgc
ggcaagctgcgggagcgcgcctccaagaccgacaagatcgccaccggtgacgtggagctg
tatgtctcggaactgcgggtgctcagcgaagcccagaccccgcccttcgagatccgtgac
gagatcaacgttaatgacgacctgcgtctgcgctaccggtatctggatctgcgccgtccc
tccatgcatgagcccatcgtgctgcgcagcaagatcatgcagatcatccgcagctacttc
actgacaaccactttaccgagatcgagacgcccaccctcatcaagtccacgccggagggc
gcccgtgactatctggtgcccagccgcgtgcagccgggccacttctacgcgctgccccag
agcccgcagctctacaagcagatcctgatgctgtccggctttgaccggtatttccagatc
gcccgctgctaccgcgacgaggacctgcgcgccgaccgtcagcccgagttcacccaggtg
gacgaggaaatgtcctttgtcaccgaggacgatatcatgaccgtcaacgagggactgctc
aagcgtctgtggaaagagatgctgggcatcgacctggtcaccccctttgagcggatgccc
tggaacgacgccatgagccgtttcggctccgacaagccggacacccggttcggcctggag
attcaggatgtcacttcggtgtttgcgaataccgagttcaagccctttgccgccgtcatc
gaggccaagggcaccatccgggccatcaacgccaagggcctggccgacaagctgagccgc
aagaacattgacaagctgggcgaggtcgccaagacttacggtgccaagggcctggcttac
agccgtctgaccgccgacggtacctcctccagcttcgagaagttcctcaccgaggaggaa
aagactgccctgtatgcagccctgggcgccgagacgggcgacgtgctgctgctggtcagc
gacgccgactgggtgaaggcctgcacggccctgggccaggtccgtctggacattgcccgc
aagcatgacctcatcgacaatgacaagttcaacttcctgtgggtggtggacttcccgctg
tttgagtacagcgagcaggaaggacgctggatggccatgcaccatcccttcaccatgccc
aaggcggaagatctggacaagatcgagagcgatcccggtgcctgccatgccgtggcctac
gacatcgtgctcaacggtgtggaactgggcggcggttccatgcgtatcaacgatccggcc
ctgcaggaccggatgttcaaggctttgggcttcactgaggagaaggcccgcgccagcttc
ggcttcctgatggatgcctacaagttcggtgcgccgccccacggcggtatggcctacggc
ctggaccgcatggtcatgttgatgctcaagaaggactccatccgcgacgtcattgcgttc
ccgaaggtgcagaacgctggtgagcccatgagcggcgcccctgatgtggtggacgagaag
cagctggctgatctgtccattgcgctgaccctgccggaaaaagaataa
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