Subdoligranulum variabile: NQ490_12030
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Entry
NQ490_12030 CDS
T08454
Name
(GenBank) peptidoglycan-binding protein
Organism
svj
Subdoligranulum variabile
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Gene cluster
GFIT
Motif
Pfam:
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UWP67660
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Position
complement(2566570..2568096)
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AA seq
508 aa
AA seq
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MKNFQKQFSLTADGLVGKATWYKISYIYVSVKDLAELTSEGETATGTESSGSWPGVVLKR
GSTGSEVEQVQFWLSELAQFNSALPALTVDGNFGAATERAVKIFQQEQGLTADGVVGQAT
WEALYSAWLDMQSDLGGTAWPGIVLRRGDTGMEVRLVQFWLRLAAENYSALAAVSVDGNF
GASTQRAVTGFQSLFGLTADGLVGRATWNKLNEVALAVANEIVEPNVAPGQFTTTVREGN
RGTTVRAVQYYLRRLSAYYSDIPSVTVDGVFGSATTKAVKAWQARAGLTVDGVVGRLTWN
SLYAAVENLAESGPVVRAASLPAPTSTLQPGDTGASVLRLDRLLLFLGQWLPEINFLGST
APSDVYSNDLEITVRSAQRYFGLPETGQVTAADWNVFLKAAQSLSEVNPAAAAPEPDGIW
PASALTLGSSGPAVLQVQRWLNLIASVDQGYSFVPETGDFDDATQNALENYQLTAGLPTL
GVVDAATWESLRTAAEALCSTCQQAKEG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacttccagaaacaattcagcctgaccgccgacggtttggtaggtaaggcaacc
tggtataaaatcagctacatctacgtcagcgtcaaggatctggccgagctgaccagcgaa
ggcgagactgccaccggcacagaaagttccggcagctggcccggcgtggttctcaaacgg
ggttccaccggcagcgaagtggagcaggtgcagttctggctttcggaactggcacagttc
aacagtgccctgccggctctgacggtggacgggaactttggtgccgccaccgagcgggcc
gtcaagattttccagcaggagcagggcctgacagccgacggcgttgtggggcaggccacc
tgggaggcactgtattccgcctggctggatatgcagagtgacctgggcggcaccgcctgg
cccggcatcgtgctgcgtcgcggagacaccggtatggaagttcgtctggtacagttctgg
ctgcggctggcggcggaaaactactcagccctggccgccgtcagtgtggatggcaatttc
ggcgcctccacccagcgggctgtcacgggattccagagcctgttcgggctgacggcagac
ggtctggtgggccgtgccacctggaacaaactcaacgaagtggcgctggccgtagccaac
gagatcgtggagcccaatgtagctcccggccagttcaccaccaccgtgcgggaaggcaac
cgcggcaccacggtgcgggctgtccagtactatctgcgccggttgtcggcgtactacagc
gacatcccctcggtgacagtggacggcgttttcggttcagcgacgaccaaagccgtgaaa
gcctggcaggcccgggcgggcctcacggtagatggtgttgtgggacggctgacctggaac
agtctgtatgccgccgtggagaatctggcagagagcggccctgtggtacgggcagcttct
ctgccggcgccgacttcgacgctgcagcccggcgataccggtgcctcggtgctgcggctg
gatcgtctgctccttttcttgggacagtggctgcccgagatcaactttttgggcagtacc
gcacccagtgatgtatactccaacgacctggagatcaccgtccgcagcgcccagcggtat
ttcggcctgccggagaccggtcaggtgaccgccgccgactggaatgttttcctgaaagca
gcgcagtccctgtccgaggtcaaccctgcggccgccgccccggaaccggatggaatctgg
cctgcttcggcgctgacgctgggcagttccggccctgccgtgctgcaggtgcagcgctgg
ctgaatctgattgcctcggtggaccagggatacagctttgtaccggagaccggggatttc
gatgacgccacccagaacgcgctggagaattaccagctgactgccggtctgccaacgctg
ggcgtggtggacgcagccacctgggagagtctgcgcaccgccgccgaggcgctgtgcagc
acctgccaacaagccaaggagggataa
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