Subdoligranulum variabile: NQ490_12920
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Entry
NQ490_12920 CDS
T08454
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
svj
Subdoligranulum variabile
Pathway
svj02024
Quorum sensing
svj03060
Protein export
svj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NQ490_12920 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NQ490_12920 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NQ490_12920 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
svj02044
]
NQ490_12920 (ffh)
Enzymes [BR:
svj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NQ490_12920 (ffh)
Secretion system [BR:
svj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NQ490_12920 (ffh)
Eukaryotic Sec-SRP protein
NQ490_12920 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_33
AAA_30
nSTAND3
AAA_17
6PF2K
Thymidylate_kin
NPHP3_N
HECW1_helix
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UWP67822
LinkDB
All DBs
Position
2740773..2742128
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AA seq
451 aa
AA seq
DB search
MAFESLTERLNGVFKKLRGKGKLNEADIKAAMREVRMALLEADVNYKVAKDFCAQVSERA
MGQEVMESLTPAQQVVKIVNEELTKLMGGDEPQYLHIKNKGQTVLMMCGLQGNGKTTHAA
KLGKYYRSQGRRPLLVACDVYRPAAIQQLQIVGEQAGVPVFTMGTEKPEHIAQQAMAHAR
DHGNDIVILDTAGRLQIDDALMDELVRIKEAVEVDETLLVVDAMAGQEAVNVAKTFNEKI
GITGVVLTKTDGDTRGGAALSVLAVTGKPIYFQGTGEKLEDLEPFYPSRMASRILGMGDV
LSLIEKAQSVQNDKEAEAAARRMMENKFDMNDLLAQFQQVKKMGGASALLAMMPGGNQID
ADALDDKMLPRIEAIIYSMTPAERAKPEIINPKRKRRIAAGSGQTVEAVNKLLRQYEMMQ
KMMKKVRRNPKGFMRSLGNLGGMGGFKGFGR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgaatcattgacagagcgcctgaacggcgtattcaaaaagctgcgcggcaag
ggcaagctcaatgaagcggacatcaaggcggccatgcgggaagtccgtatggcgctgttg
gaagccgacgtcaactacaaggttgccaaggatttctgtgcgcaggtctcggagcgtgcc
atgggtcaggaggtcatggagagtctgacccccgcccagcaggtggtcaagatcgtcaac
gaagagctgaccaagctcatgggcggcgacgaaccgcagtatctgcacatcaagaacaag
gggcagacggtcctgatgatgtgtggtctgcagggcaatggtaaaaccacccacgccgcc
aaactgggcaagtattatcgcagtcagggccgccgcccgctgctggttgcctgtgacgtg
tatcgcccggcagccatccagcagttgcagattgtgggtgaacaggccggtgttcccgtc
tttaccatgggcaccgaaaaaccggaacatattgcccagcaggcgatggcccacgcccgg
gatcacggcaacgatattgtgatcctcgatactgccggccgtctgcagatcgacgatgcg
ctgatggatgagctggtgcgcatcaaggaagccgtcgaggtggacgagacgctgctggtg
gtggatgccatggccggccaggaagccgtgaacgtggccaagacctttaacgaaaagatc
ggcatcaccggtgtggtactgaccaagaccgacggcgatacccgcggtggtgcagccctc
tcggtgctggcggttacgggtaagccgatctactttcagggcaccggcgaaaagctggag
gatctggaacccttctatccctcccggatggccagccgtatcctcggcatgggcgatgtg
ctttccctcatcgagaaagcccagagcgtccagaacgacaaggaagcggaagccgccgcc
cggcggatgatggaaaacaaatttgatatgaacgatctgctggcgcagttccagcaggta
aagaagatgggcggcgcctcggcgctgctggcgatgatgcccggcggcaaccagatcgac
gccgacgcgctggacgacaagatgctgccccgcatcgaggccatcatctattccatgacc
ccggcggaacgggccaagcctgagatcatcaatcccaagcgtaaacgccgcatcgcggcc
ggttccggccagacggtggaggcagtaaacaaactgctgcgtcaatatgaaatgatgcag
aaaatgatgaagaaggtccgccgcaatcccaagggattcatgcgcagcctgggaaatctg
ggcggtatgggcggcttcaaaggcttcggccgctga
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