Subdoligranulum variabile: NQ490_13830
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Entry
NQ490_13830 CDS
T08454
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
svj
Subdoligranulum variabile
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svj03032
]
NQ490_13830
03036 Chromosome and associated proteins [BR:
svj03036
]
NQ490_13830
03400 DNA repair and recombination proteins [BR:
svj03400
]
NQ490_13830
DNA replication proteins [BR:
svj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NQ490_13830
Chromosome and associated proteins [BR:
svj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NQ490_13830
DNA repair and recombination proteins [BR:
svj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NQ490_13830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-HIG
SIMPL
VWA_3
DUF58
DUF2267
HU-DNA_bdg
DUF6262
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
UWP67994
LinkDB
All DBs
Position
2937293..2937565
Genome browser
AA seq
90 aa
AA seq
DB search
MTKVELIAAVANEANLTKKDAEQAVNTALNAITEALKNGDKVTLVGFGTFEVRERPARKG
RNPQTGAEITIEASKLPAFKAGKALKDAVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagttgaattgatcgccgctgttgcgaacgaagccaacctgaccaagaaggac
gccgagcaggctgtcaacaccgccctcaacgccattaccgaggcgctgaagaacggtgac
aaagtgaccctggtgggctttggcacgttcgaggtccgtgagcgtccggcccgcaaaggc
cgcaacccccagaccggcgctgagatcaccatcgaggcgtccaagctgcccgctttcaag
gccggcaaggctctgaaggacgctgtgcagtaa
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