Subdoligranulum variabile: NQ490_14290
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Entry
NQ490_14290 CDS
T08454
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
svj
Subdoligranulum variabile
Pathway
svj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ490_14290 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svj03400
]
NQ490_14290 (uvrA)
DNA repair and recombination proteins [BR:
svj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ490_14290 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ490_14290 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_23
AAA_16
DnaJ_CXXCXGXG
AAA_33
nSTAND1
nSTAND3
AAA_25
AAA_22
nSTAND6
AAA_18
Viral_helicase1
NACHT
ATPase
DUF4350
cobW
MMR_HSR1
MeaB
BCA_ABC_TP_C
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
UWP68079
LinkDB
All DBs
Position
3033015..3035915
Genome browser
AA seq
966 aa
AA seq
DB search
MNTAPKETKRKSKIQIDPNNRIVIKGAREHNLKNVDLVLPRNKLIVMTGLSGSGKSSLAF
DTIFADGQRRYMESLSSYARQFLGQMEKPDVDEITGLSPAISIDQKTTSHNPRSTVGTVT
EIYDYLRLMYARIGVPHCPICGREITQQSIDEMVDEVMKLPERTRFQVLAPVVRGRKGTQ
AKELEAARRAGFARVRIDGNMYDLGEEISLEKNIKHTVEIVVDRLVINDTVRGRLADSIE
TALAQTGGLVLVDVIGGEPMMFSQSYACPEHGISVEELTPRMFSFNNPFGACEKCTGLGT
FMKVDPARVIPDKRKSIRESAIKASGWYYAEGSISEMTYVALGKRYGFTLDTPIKDFSEE
ALHALLYGTGEERIEMQRESMFGSGTYYNQFEGIIPNLERRFRETSSEWVKEEIALVMSS
EECPACHGRRLKPTSLAVTVGGINIADFCDKSVSEELEFIRNAKVSERDEMIGAPIFKEV
KERLGFLESVGLGYLTLSRGAASLSGGESQRIRLATQIGSALTGVLYVLDEPSIGLHQRD
NDKLIATMKRLRDLGNTLIVVEHDEDTMRQADYIVDVGPGAGVHGGEIVAAGSVSDICKV
KRSVTGAYLSGRKFVEVPETRREGNGKFLRVVKAHENNLQNITVDFPLGKMICVTGVSGS
GKSTLINEILYKTLAAALNGARSRPGQCEEVQGMEWVDKVIGIDQSPIGRTPRSNPATYT
GVFGDIRALFASTQDAKMRGYGPGRFSFNVKGGRCEACEGGGILQIEMHFLPDIYVPCDV
CKGKRYNRETLEVKYKDKNISDVLDMTVEEACNFFANIPKIARKLQTLQEVGLGYIQLGQ
AATTLSGGEAQRVKLANELARRGTGQTVYILDEPTTGLHVADVHRLVKVLDKLVDAGNTV
IVIEHNLDVIKRADYIIDLGPEGGSGGGRIVATGTPEEVAENPNSFTGQYLKPMLERARQ
LQQKEK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
ttgaatactgcaccgaaagaaaccaaacgaaaatccaaaattcagatcgatcccaataac
cggattgttatcaaaggtgcccgggaacacaatttgaaaaacgtggatctggtgctgccg
cgcaataagttgattgtgatgacagggctgtcgggttctggtaagtccagcctggctttt
gacactatttttgccgacggccagcgccggtatatggagagcctttccagctatgcgcgg
cagtttttaggccagatggaaaagccggatgtggatgaaatcacgggactttccccggct
atctccattgatcagaagaccaccagccataacccccggtctaccgtaggcacggtcacg
gaaatttacgactatctgcgtctgatgtatgcacggattggcgtaccgcattgcccgatc
tgcggccgggaaatcactcagcaatccatcgatgagatggtggatgaggttatgaaattg
ccggagcgaacccgcttccaggtactggcaccggtggttcgtggacgcaagggcacccaa
gccaaggaactggaggccgcacggcgtgcgggctttgcgcgtgtccggattgacggaaac
atgtatgatctcggcgaagagatcagtctggaaaagaatatcaagcatacggtcgagatt
gtggtggaccgtcttgtcatcaatgacacggttcgcgggcgcctggcggactccattgag
acggccctggcgcagaccggcggtctggtactggtcgatgtaatcggcggggagccgatg
atgttcagtcagagctatgcctgtccggaacatggcatttcggtggaagaactgacgccc
cggatgttcagcttcaacaatccttttggcgcctgcgaaaaatgtacgggtttggggacc
ttcatgaaggtggacccggcccgggtcattccagataagcgcaagtccatccgggaaagt
gctatcaaggccagtggctggtactacgcggaaggctccatctcggagatgacctatgtt
gcccttggcaagcggtatggcttcacactggatacgcccatcaaggatttcagcgaggag
gcactgcacgcgttgctctacggaaccggagaggaacgcatcgagatgcagcgggagagc
atgtttggctccggcacttactacaaccagtttgagggcatcattcccaatctggaacgc
cgattccgggagacgagcagcgagtgggtcaaggaagaaatcgcgctcgtcatgtccagc
gaggaatgtccggcatgtcatggtcgtcggctgaagccgaccagtctggcggttacggtg
ggcggcatcaacatcgcggatttctgcgataagagcgtcagtgaggaactggaattcatc
agaaatgccaaagtcagtgaacgggacgagatgattggcgcaccaattttcaaggaagtc
aaagaacgactgggattcctggaaagcgtaggtctgggatatctgacattgtcccgtgga
gctgcttctctttcgggcggcgagagccagcgtatccggctggcgacacagatcggcagc
gctttgaccggcgtgttgtacgtgctggatgagccgagtatcgggctacaccagcgcgac
aacgacaaactgattgctaccatgaaacgtctgcgcgacctgggaaatacgttgatagtc
gtagaacacgatgaagatactatgcgtcaggcggactatatcgtggatgtgggaccgggt
gcgggtgtccacggcggtgagattgtggcagcgggcagtgtgtcggacatctgcaaggtc
aaacgcagcgtgaccggcgcctatctgtcgggccgcaagtttgtggaagttccggaaaca
cggcgggaaggcaatgggaaatttcttcgggttgtcaaagcgcatgagaacaatctgcag
aacattacggtggatttcccgcttggcaagatgatttgcgtaaccggtgtctccggttcc
ggcaaatccacattgatcaatgagatcctgtataagacgttggccgcagcactgaacggc
gcccgcagccggcccggtcagtgcgaagaagtgcagggcatggaatgggtggataaagtg
attggcattgatcaatcgcccattggccgcacacctcgttccaatccggcaacctacacc
ggtgtatttggcgatatccgtgccctgtttgccagtacgcaggacgccaagatgcgcggt
tacggtcccggccgtttcagtttcaacgtcaagggcggccgctgtgaggcctgcgaaggc
ggcggtatcctgcagattgagatgcattttttgccggatatttatgttccgtgtgatgtc
tgcaaaggaaaacgttataaccgtgaaacactggaagtaaaatacaaggataaaaatatc
tccgacgtattggacatgacagtggaggaggcctgcaatttctttgccaacattcccaag
attgcccgtaaactgcaaacgctgcaggaggtcggtcttggctatattcagctgggccag
gcagctaccacactgtcgggcggtgaggcacagcgcgttaagctggctaacgagctggca
cgtcggggaacaggccagacggtctatattctggatgaacccacaaccggcttgcatgtg
gcagatgtacaccgcctggtaaaggtactggataagttggtagatgcaggtaatacggtt
attgtcattgagcacaatctggacgtaatcaagcgcgcagattatatcattgatctggga
ccggaaggcggcagcgggggaggtcgaatcgtggctaccggcacgccggaagaggtggcg
gaaaatccgaactcctttacaggacagtatctgaagccgatgttggagagagcacgtcag
ctgcagcaaaaagaaaaataa
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