Subdoligranulum variabile: NQ490_14295
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Entry
NQ490_14295 CDS
T08454
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
svj
Subdoligranulum variabile
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svj03016
]
NQ490_14295 (miaB)
Enzymes [BR:
svj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NQ490_14295 (miaB)
Transfer RNA biogenesis [BR:
svj03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NQ490_14295 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
UWP68080
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All DBs
Position
3036076..3037461
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AA seq
461 aa
AA seq
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MEKLTYTHNDEAAKMLAAYYETPPLAFVRSYGCQQNVNDGEKIRGVLQDVGFGICDTLED
ADLILFNTCAVREHAEQRVFGNIGALKKLKEQNPRLIIGVCGCMAQQPHIVEKLRQSYPY
VDLVFGVDGIDRLPAMLAERLRRGKRYLETPEQRNAVVEEMPIRRDSGFRAWLPIMYGCD
NFCTYCIVPYVRGRERSREPDAILAEFRDLITKGYKEITLLGQNVNSYGKGLGNPIDFAD
LLNLLCAVPGDYQIRFMTSHPKDASRKLIDTIAAQPHMCKHIHLPVQSGSNRLLQQMNRH
YTVEQYLDLVDYARNKIPGVTFSSDIIVGFPGETEEDFEATLELVRKVGYMQLFTFIYSK
RNGTPAAKMPDPTTHAEKAARMERLLRTQDEIAFAAIASMAGQNVRVLVEAAGRTPGTVN
GRLDNNLVVEFPAPEMLIGQWARVNLTGSRAALLTGELVDE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaattaacttatacccataatgatgaagcggccaaaatgctggcggcttactac
gaaacaccacctttggcgtttgtgcgcagctacggctgccagcaaaatgtcaacgatggc
gagaaaatccgcggtgtattacaggacgtcggcttcggtatctgtgatacactggaagat
gcggatctgatcctgttcaacacctgcgctgttcgagagcatgcagaacagcgtgtgttc
gggaatattggtgcgctgaagaagctcaaagaacagaatccgcggctgatcatcggtgtg
tgcggttgtatggctcagcagcctcatattgtggaaaaattgcgtcagagctatccttac
gtagacctcgttttcggagtggatggaattgaccgcttgccagcgatgctggcggagcgt
ctgcgccgcggcaagcggtatttggaaacaccggaacagcgcaatgccgtggtggaggaa
atgccgatccgccgtgactcaggcttccgtgcctggctgccgattatgtatgggtgcgac
aatttctgcacctattgcatagtaccctatgtacgtggacgtgagcgcagccgggaaccg
gatgcgattctggcggaattcagggatttgattaccaaggggtacaaagagattactctg
ctgggacagaatgtcaacagttacggcaagggactgggaaatcccatcgactttgctgat
ctgctcaatctgctttgtgccgtgccgggagactaccagatccgtttcatgaccagccac
ccgaaagatgccagccgtaaactgatcgataccattgccgcgcagccgcatatgtgcaaa
catattcatctgccggtacaatccggcagcaatcggcttctgcagcagatgaaccggcat
tatacggtggaacaatatctggatctggtggattatgcccgcaataaaatacccggcgtg
acattttccagcgatattattgtgggattccccggagaaaccgaggaagacttcgaggcg
acgttggaacttgtgcgcaaagtgggatatatgcagctgtttacctttatctattccaag
cgcaacggcacgccggccgccaaaatgccggatccgaccacccatgccgagaaagcggcc
cgcatggaacggttgcttcgcacgcaggatgagattgcctttgctgccatcgcttcgatg
gcggggcagaatgttcgggtcctggtggaggctgccggtcgcacacctggcacagtgaat
ggtcgccttgacaacaatctggtggtggaattccccgcaccggaaatgttgatcggtcag
tgggcgcgggtgaatcttacgggttcccgtgccgcacttctgaccggtgaactggttgat
gaataa
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