Subdoligranulum variabile: NQ490_14305
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Entry
NQ490_14305 CDS
T08454
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
svj
Subdoligranulum variabile
Pathway
svj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NQ490_14305 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svj03400
]
NQ490_14305 (mutS)
DNA repair and recombination proteins [BR:
svj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NQ490_14305 (mutS)
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Ortholog
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UWP68082
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Position
3037943..3040561
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AA seq
872 aa
AA seq
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MAEQAVSPMMQQYFEIKKQHPNEILFYRVGDFYEMFYDDALTASRELELTLTGKNCGKEE
RAPMCGVPFHSYETYVARLIAKGYKVAICEQMEDPALAKGLVKRDIIRVVTPGTVIESSM
LAEDKNNYLCSIYCKRRRGHWRAGICFADISTGEARATELNAEKIGGAIITELCRYMPSE
ILICPPMLDFKDVTGYIKQHTSALVELREEACYKDALLESTMAGQFGPEWRTTLGYDEDA
LVPYAVAALLNYLQETQKHGLERIKTVDNYADAQYMRLSPVTRANLELTETMRGREKRGT
LLWVLDKTETSMGKRLLRSWIEQPLVDAEAINARLSAVQALYTANIARADLKEALSHVFD
IERLTTRILYGSATPREVKALGDTCARLPEVKTQASACGAPLLTQLADQIDPLDDLLQKI
TTALVDDPPATLKDGGAIRAGYNSEVDELRDIMHGGKGYLANLETKLREETGIPKLKIGF
NKVFGYYIEVSRSYTDSVPDSFTRKQTLTTGERYITPELKELENKILGANERLLVLEHQL
FADLLSEISAQIVRIQRTALAVAQLDVLAGFAEVALQNNYVLPVVDQSGVIEIKEGRHPV
IEQMLKGTLFVPNDTLLDEGENRMLLITGPNMAGKSTYMRQNALIALMAQIGCFVPAASA
HIGVVDAIFTRVGASDDLAAGQSTFMVEMTEVAEILRHASKNSLVILDEIGRGTSTFDGM
SIARAVVEYICDNIGCKTLFATHYHELTSMDQDIYGVKNYNIAVKKRGEDITFLRRIVAG
PADDSYGIEVAKLAGLPSSVTKRAHAVLRQLEASAPGRNQTMQLDFETVEAYNNPSVPSE
VVDKLHSVDIETLTPLEALNFLYELKNVLDKD
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaagcagtatcgcccatgatgcagcagtattttgaaatcaagaaacaacat
cccaacgagattctattctatcgtgtcggcgatttctatgaaatgttctatgatgatgcc
ctgacagcttcgcgggaactggaactgaccttgaccggcaaaaactgcggcaaagaagag
cgggccccgatgtgcggggtgccgtttcactcctatgaaacctatgtggcccgacttatc
gccaaggggtacaaagtagctatctgtgagcagatggaggacccggcactggccaagggt
ctggtcaaacgggatattatccgcgtggtcacgccgggcacggtcatcgagagcagcatg
ctggcggaagacaagaacaattatctgtgcagcatctactgtaagcgccgccgaggccat
tggcgtgcgggaatctgttttgcagatatctccacaggcgaagcgcgtgccacggaactg
aacgctgagaagataggcggggcaatcattacggaactgtgccgttatatgcccagtgaa
attctgatctgcccgccgatgctggacttcaaagatgtgacgggctatatcaagcagcat
accagcgccttggtggaactgcgggaggaggcctgttataaggacgcccttttggaatcc
accatggccgggcaattcggtcccgaatggcggaccaccctggggtatgacgaagatgcg
cttgttccttatgccgtggcagcactccttaattacctgcaggaaacgcagaagcatggc
cttgaacgcatcaagacggttgataactatgccgatgcacagtacatgcggttgtccccg
gtgactcgtgccaacctggagttgacagaaacgatgcgtggccgcgagaagcgtggtacg
ctgctttgggtgctggacaagacagaaacctccatgggcaagcgattgctccgttcctgg
attgaacagccgctggtggatgcggaggccatcaatgctcggctgtcggcggttcaggca
ctgtataccgccaatattgcccgcgcagatctgaaagaggcattatcccatgtgttcgat
attgaacggttgacgacccgcatcctgtatggatcggcaacaccccgtgaagtcaaggct
ctgggagatacctgcgcccgcctgccggaggtcaaaacacaggcgtccgcctgcggagca
ccgttgctgacccagttggcggatcagatcgatccgctggatgatttgctgcagaagatt
accacagccctggtggatgatcctccggctacgctgaaagacgggggagccatccgtgcc
ggttataacagcgaagtggatgaactgcgggacatcatgcatggcggcaagggctatctt
gccaatctcgaaaccaagctccgtgaggaaacgggcattcctaagctgaagattggcttt
aacaaggtgtttggctattatattgaagtcagtcgttcctatacggattcggtgccggac
agctttacccgcaaacagactctgactaccggtgagcgttacattactccggaactcaag
gaactggaaaacaaaattttgggtgcgaatgagcggcttttggtgctggagcatcaactg
tttgcggatcttctgtcggaaatttccgctcagattgtgcgcattcagcgcacggccctg
gctgttgctcaacttgacgttctggccgggtttgcagaggttgctttgcaaaataactat
gttctgccagtggtggatcagagcggcgttatcgaaatcaaggaaggccgccatccggtt
atcgaacagatgctcaaagggacactgtttgtgcccaacgatactctgctggatgagggc
gaaaaccgcatgcttttgattaccggccccaatatggctggtaaatctacctacatgcgt
caaaacgcgctgattgctctgatggcgcaaatcggctgttttgtgccggccgccagcgca
cacatcggtgtggtggatgcgatttttacccgtgtgggcgcatcggatgacctggctgct
ggacagtccacttttatggtggaaatgaccgaggtggcagaaatcctgcgccacgccagc
aaaaacagcctggtgatcctggacgagattggccgtggaacctctacctttgatggtatg
agtattgcgcgggctgtggtggagtatatctgcgacaatattggatgcaagacactgttt
gccacccactaccacgagctcaccagcatggaccaggatatctacggcgtgaagaactac
aatatcgctgtcaagaaacgcggggaagacattactttcttgcgccggattgtggcgggg
cctgcggatgacagttatggcattgaggtggcgaagctggcgggacttccctccagcgtg
accaagcgtgctcacgccgtgctgcgccagctggaggccagcgcaccgggacgaaaccag
acgatgcagctggattttgaaacggtggaagcctacaacaatccgtcggtccccagcgaa
gtggtggacaagctgcacagcgtggacattgagacgctgacgccgctggaagcactgaac
tttctgtatgaactgaaaaatgtattggataaagactaa
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