Subdoligranulum variabile: NQ490_15095
Help
Entry
NQ490_15095 CDS
T08454
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
svj
Subdoligranulum variabile
Pathway
svj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NQ490_15095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svj03400
]
NQ490_15095
DNA repair and recombination proteins [BR:
svj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NQ490_15095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
KR
CCDC84
Motif
Other DBs
NCBI-ProteinID:
UWP68229
LinkDB
All DBs
Position
complement(3194280..3196652)
Genome browser
AA seq
790 aa
AA seq
DB search
MDTAYKTTLELDKIIARAVQLCACQETKEMMRGLEPCATPEDERFALSQTNAVNSLLIKN
GSPRFGRVSEVRRITAHAQKGGILSMGELLEIAATLRNFAGLSQWYGLSEHEMLPTDDLF
YALAPQPVLEKQISESILSPEEMADTASVTLHDLRRKIRQTEDSIRTKLDNIIKNSTTNK
FLQDAVVSLRNGRYVVPVRAEYRGEVGGVIHDVSSTGATIFVEPTAVVEANARIMQLRAQ
EQEEITRILSAFSAQVGSLEPQFSYSYEAMLQIDLLLAKARLAVEQNAFMPTVSDTVYFR
LNRARHPLIDKKQVVPVDIALGEEYDTLVITGPNTGGKTVSIKTAGLLNAMAQHGFLIPA
HESSVVCNFREYLVDIGDEQSIEQSLSTFSGHMKRISGILQLAGHGTLTLIDELGAGTDP
AEGAALAVSILEQLRRQGSLLMATTHYAELKVYALETPGVVNASCEFNVETLMPTYKLSV
GVPGKSNAFLISAKLGIPQEIIDAARNHMSNDDKRLDSVLAQLDDLKLQLKGAQDEAEKA
RYEAEHALESAEKKREELIEQGKRELEDARRQAHELMQQVQNEAYNLTDELRRIQKDEKT
SAAQRAVRAREIARKDTETLLKRTDAKPVPKKFVPLKEVQIGQEVVIAELNQLATVTARP
DRDGMVEVRAGIMKTKVPLTGLRAPDKMEKRPQREPRRSSTRVQLDKNRKTSMELNLLGY
TVEEALAEVDKFLDSGMLRGQQTLYIIHGNGTGALRSAIQKHLRTHKAVKSFRLGRYGEG
ESGVTVVELK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggataccgcttataaaaccaccctggaattagataagatcattgcccgtgcggtacaa
ctctgtgcctgccaggaaaccaaggagatgatgcggggcctggagccctgcgcgacgccc
gaggatgaacgttttgccctgtcccagacaaacgccgtcaactcgttgctcatcaagaac
ggcagcccccggttcggcagagtatcggaggtacgtcgcatcacggcccatgcccaaaaa
ggcggcattctttctatgggcgaactgctggaaatcgctgcgacgctgcgcaactttgct
ggattgtctcaatggtacggactgagcgaacacgagatgctgcccacagatgatttgttt
tatgcactggcaccgcagccggtgctggagaaacagatcagtgagagtattctttctccg
gaggaaatggcggacactgccagcgttacgctgcatgatctgcgccgcaagatccggcag
acggaggattctatccgtaccaagctggacaacattataaagaattcaaccaccaacaaa
ttcctacaagacgcggtagtctcgctgcgaaacggacggtatgtagttccggttcgcgct
gagtatcgcggcgaggttggcggcgtaatccacgacgtatcttcgaccggcgccacaatt
ttcgtggaaccgacggctgttgtggaggccaatgcgcggattatgcagctgcgcgcccag
gagcaggaggaaatcacccgcattctttcggcgttctcggcacaggtcggttcgctggag
ccgcagttctcctacagctacgaggcaatgttgcagattgatttgctgctggccaaagca
cggttggcggtggagcagaatgcttttatgccgactgtcagtgacaccgtgtacttccgg
ttgaaccgggcgcggcatccgctgattgacaagaaacaggtcgtgccggtggatattgca
ctgggagaagaatatgataccttggtgattaccggtcccaataccggcggcaaaacggta
tccatcaaaaccgcaggtctgctcaatgccatggcgcagcacggatttttgatccccgcg
catgaaagcagcgttgtctgtaatttccgggaatatcttgtcgatatcggtgacgagcag
agcatcgagcaaagcctctccaccttttccggacacatgaagcggatcagcgggattctt
cagcttgccggtcacggcactctgacgctgatcgatgagctgggggccggtaccgatccc
gcggaaggtgccgctttggcagtcagcatcctggaacaactgcgtcggcagggaagtctg
ctcatggcgacaacgcactatgcggaattgaaggtttacgcactggaaacgcccggtgtg
gtaaacgccagctgtgagtttaatgtagagacactgatgccgacctacaaactcagtgta
ggtgtccccggcaagtccaatgcattcctgatcagcgccaaattgggaattccccaggaa
atcatcgatgcagcccgcaaccacatgtccaacgatgataaacgcttggatagtgtgctt
gctcagttggatgatttgaagctgcagctgaagggagcacaggacgaggcggaaaaggcc
cgctacgaggcggaacacgcccttgaaagtgcagagaaaaagcgggaggagctgattgaa
cagggaaaacgcgaactggaagatgctcgtcgtcaggctcatgaactgatgcagcaagta
caaaatgaggcctataatctgaccgatgagcttcggcgcattcaaaaagacgaaaaaaca
agtgcggcacagcgcgccgtgcgtgcccgtgaaattgcacgcaaagataccgagacactt
ctcaaacgcactgatgcgaaaccggtccccaaaaagtttgttccgcttaaagaagtgcag
atcggacaggaagtggtcattgcggagctcaaccaattggctactgtcaccgcgcgcccc
gatcgcgatggcatggtggaagtacgtgccggtattatgaagaccaaagtgccgttgact
ggtcttcgtgctcctgacaagatggaaaagcggccccaacgggagccccgtcgctccagc
acacgggtacaactggacaagaaccgcaagaccagcatggaactgaatctgctgggctat
accgtcgaggaggccttggcagaagtagacaagtttctggatagtggcatgctgcgcggt
cagcagacgctgtatattatccatggcaatggcactggagccctgcgcagtgccattcag
aaacaccttcgaacccacaaagcggtcaaaagtttccgccttggccgctacggcgaaggg
gaaagcggcgtcaccgtcgtggaactgaaataa
DBGET
integrated database retrieval system
