Streptomyces violaceusniger: Strvi_0903
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Entry
Strvi_0903 CDS
T01602
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svl03016
]
Strvi_0903
Enzymes [BR:
svl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Strvi_0903
Transfer RNA biogenesis [BR:
svl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Strvi_0903
Prokaryotic type
Strvi_0903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEM80674
UniProt:
G2PBQ2
LinkDB
All DBs
Position
705828..706694
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AA seq
288 aa
AA seq
DB search
MSDEAAPGFVRVRLDLSYDGKDFSGWAKQRERRTVQGELESALRTVTRSSETFELTVAGR
TDAGVHARGQVAHVDLPEALWAEHRDRLLRRLAGRLPHDVRVWKVAQAPPGFNARFSAIW
RRYAYRVTDHPGGVDPLLRGHVLWHDWPLDVAAMNAASERLLGEHDFAAYCKKRDGATTI
RTLQRLDWVRGADGVITATVRADAFCHNMVRSLVGALLFVGDGHRPWDWPAKVLAAGVRD
SAVHVVRPHGLTLEEVGYPADDQLAARNRESRNKRSLPGATAIGSGCC
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgaggcggcgcccggtttcgtacgggtccggctggatctgagttacgacggc
aaggacttctcgggctgggccaagcagcgcgagcggcgcaccgtgcagggcgagctggag
agcgcgctgcggacggtgacgcgctcctcggagaccttcgagctgaccgtcgcgggccgc
acggacgcgggggtccatgcccgcggccaggtggcgcatgtggatctgcccgaggcgctg
tgggccgagcaccgggacaggctgctgcggcggctcgccggccggctgccccatgacgta
cgggtctggaaggtcgcgcaggccccgcccgggttcaatgcccgcttctccgcgatctgg
cggcgctacgcctaccgggtcaccgaccaccccggcggggtcgatccgctgctgcgcggc
catgtgctgtggcatgactggccgttggacgtggccgccatgaacgcggcctccgaacgg
ctcctgggcgagcacgacttcgccgcgtactgcaagaagcgtgacggcgcgaccaccatc
cgcaccctccagcggctggactgggtgcgcggcgcggacggtgtcatcacggcgaccgtg
cgggcggacgccttctgccacaacatggtgcgctcgctggtgggcgccctgctcttcgtc
ggcgacggccaccgtccctgggactggccggccaaggtgctcgccgcgggggtgcgcgac
tccgccgtccatgtcgtccgtcctcatggtctgaccctggaggaggtcggctatccggcc
gatgaccaactcgccgcccgtaaccgggagtcccgcaacaagcgctccctgccgggcgcg
acggcgatcggttccggctgctgctga
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