Streptomyces violaceusniger: Strvi_1038
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Entry
Strvi_1038 CDS
T01602
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
svl
Streptomyces violaceusniger
Pathway
svl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Strvi_1038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_1038
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Strvi_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF4604
Motif
Other DBs
NCBI-ProteinID:
AEM80805
UniProt:
G2NSR7
LinkDB
All DBs
Position
complement(865658..866758)
Genome browser
AA seq
366 aa
AA seq
DB search
MRSIWNGNISFGLVSIPIKMYPATEDHSISFRQIHTRDGGRIRYRKVCELEGKPVESSEI
GRAYEDADGALVPITEEDLEALPLPTTHTLEIEAFISAAEIDPLQMGDAYYLGTSGAAAA
KPYTLLREALKRSEKVAIAKYAHRGRERLGMLRVVGDTIALHRLLWPDEVREPAGVAPKE
KVTVKPAELDLADTLMETLGEVDLNDLRDEYHEALEELVAAKVSGATLTAEPGERPAGAQ
VVDLMAALKESVRSAKEARGEEAGEGAKGEAEEEEEGEGAEATVHELRGRKKAPAKKAPA
AAKRTATAKRTATAKRGGTKTPKTAESAEEPAGKAAGKKQTGTKKAAAKKTTAKKQTGKR
GTRTAS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctatctggaatgggaacatttccttcggtctggtgagcattccgatcaagatg
tatccggccaccgaggaccactcgatctcgttccggcagatccacacccgcgacggcggc
cgcatccgctaccgcaaggtctgcgagctcgaggggaagccggtcgagtcgagcgagatc
gggcgggcatacgaggacgcggacggcgcgctggtcccgatcaccgaggaggacctcgag
gcccttccgctgcccaccacccacaccctggagatcgaggcgttcatctccgccgccgag
atcgacccgctgcagatgggtgacgcctactacctgggcaccagcggcgccgccgcggcc
aagccgtacaccctgctgcgcgaggcgctcaagcgcagcgagaaggtcgccatcgccaaa
tacgcccaccgtggccgcgagcggctggggatgctccgcgtcgtgggcgacaccatcgcg
ctgcaccggctgctctggccggacgaggtgcgcgagcccgcgggggtggcccccaaggag
aaggtgaccgtgaagccggccgaactggacctcgccgacaccctgatggagacgctcggc
gaggtggatctgaacgatctgcgcgacgagtaccacgaggcgctggaggagctggtggcg
gcgaaggtgtcaggcgccacgctcaccgccgagcccggtgagcggcccgccggcgcgcag
gtggtcgacctgatggcggcgctgaaggagagcgtccgcagcgccaaggaggcgcggggc
gaggaggccggggagggcgcgaagggcgaagccgaggaagaggaggaaggggagggagcg
gaggcgacggtccatgagctgcgcggccgcaagaaggcaccggcgaagaaggcgcccgcg
gcggcgaagaggacggcgacggcgaagaggacggcgacggcgaagaggggtgggacgaag
acgccaaagaccgccgagtcggcggaggagcctgcggggaaggccgccgggaagaagcag
acgggtacgaagaaggccgcggccaagaagaccaccgcgaagaagcagacgggcaagcgc
ggcacgcggaccgcctcctga
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integrated database retrieval system
