Streptomyces violaceusniger: Strvi_1205
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Entry
Strvi_1205 CDS
T01602
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
svl
Streptomyces violaceusniger
Pathway
svl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Strvi_1205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svl02000
]
Strvi_1205
Transporters [BR:
svl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Strvi_1205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEM80959
UniProt:
G2PAF0
LinkDB
All DBs
Position
complement(1037044..1038711)
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AA seq
555 aa
AA seq
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MRPRTSGPSDRPPPTRHRPRAAALAARVLCVLVVAATAGCASLVSPTAEVGADRMTDPRP
VRNGGTLAIALKSDPDKLDPSLASTAVGRTVFAAMCEKLYDVDAQDRFVPQLAAAPPTTS
DGGRTVTIKLRRGVRFADGTRMDAKAVKTSLDRHRTLPGSVRASELKPVTSVRAVGDDTV
RLRLKKPYVPLLALLADRAGMVMSPAALKRYGDGFASHPTCVGPFRYAERVVGDRIVLDK
DPNYYDADSVHLRRVIYRTITDGNVRLANLQSGDIQVGDQMDPVQVGRALTEPGLQLFNS
PSLGYYGLTLNIGNTKGAGAPPGRIDTPIARDVRVREAFDLSLDRALINTIVFQDRYRPT
CGPLPSGTPYGTGARCPARDLAKARRLLKAAKVATPVRVRLQISTTPEDNRLGQVVQAMA
KEAGFAVSLAPTEFATGLEHSRAGDFQAATTNWSGRLDPAGNIDVFAGTGGAQNYGGLSD
PAIDRLIAEGGATAGKAARHRIYARLVERVRAQHTVLYLIQPTIYVSVTKKVAGVKVFGD
GLIRVKDAGYAKGGN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaagaacgagcggacccagcgaccggcccccacccacccgccaccgaccgcgt
gccgcggccctggccgcccgggtgctgtgcgtgctggtcgtcgccgccaccgccggctgc
gcctccctggtctcccccacggccgaggtgggcgccgaccggatgaccgacccccggccg
gtccgcaacggcggaacgctggccatcgccctcaaatcggacccggacaagctggacccc
tccctggccagcaccgccgtgggccgcacggtgttcgccgcgatgtgcgagaagctctac
gacgtcgacgcccaggaccggttcgtgccgcagctcgccgccgccccgcccaccaccagc
gacgggggccgcaccgtcaccatcaaactgcggcgcggcgtccggttcgccgacggcacc
cggatggacgcgaaggcggtcaagacctccctcgaccggcaccgcacactgcccggatcc
gtccgcgcgagcgagctgaagcccgtcacctccgtcagggcggtcggcgacgacaccgta
cggctgcgcctgaagaagccgtacgtcccgctgctcgcgctgctcgccgaccgcgcgggc
atggtgatgtcgccggcggcgctgaagcgctacggcgacggcttcgcgagccaccccacc
tgcgtcggcccgttccgctacgccgagcgggtggtgggcgaccgcatcgtgctggacaag
gacccgaactactacgacgccgactccgtccatctgcggcgggtgatctaccgcaccatc
accgacggcaacgtccggctggcgaatctgcagtccggtgacatccaggtcggcgaccag
atggacccggtccaggtgggcagggcgctcaccgaacccgggctgcagctcttcaactcc
ccctcgctgggctactacggactgaccctcaacatcgggaacaccaagggcgccggggcg
ccgccgggccggatcgacacccctatcgcgcgggatgtgcgggtgcgcgaggcgttcgac
ctctccctggaccgcgccctcatcaacaccatcgtcttccaggaccgctaccgccccacc
tgcggcccgctcccctccggcaccccgtacggcaccggggcccgctgcccggcccgcgac
ctggccaaggccagacggctgctcaaggccgccaaggtggccaccccggtccgggtgcgg
ctgcagatcagcaccaccccggaggacaaccggctgggccaggtcgtccaggccatggcc
aaggaggcgggcttcgcggtgagtctggcgccgaccgagttcgccaccggcctggagcac
tcccgcgcgggcgacttccaggcggcgacgaccaactggtccggacggctcgacccggcg
ggcaacatcgacgtgttcgccggtaccggcggcgcccagaactacggcggcctctccgac
cccgccatcgaccggctgatcgccgagggcggcgccaccgcgggcaaggccgcccgccac
aggatctacgcccggcttgtcgagcgcgtccgcgcccagcacaccgtgctctatctgatc
cagcccaccatctacgtgtccgtgacgaagaaggtcgccggggtgaaggtcttcggcgac
gggctgatccgcgtgaaggacgccggatacgcgaagggagggaactga
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