Streptomyces violaceusniger: Strvi_1502
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Entry
Strvi_1502 CDS
T01602
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03420
Nucleotide excision repair
svl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Strvi_1502
03430 Mismatch repair
Strvi_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_1502
Enzymes [BR:
svl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Strvi_1502
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Strvi_1502
MMR (mismatch excision repair)
Other MMR factors
Strvi_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEM81242
UniProt:
G2NXY5
LinkDB
All DBs
Position
1367403..1371101
Genome browser
AA seq
1232 aa
AA seq
DB search
MSVGTDSLTGVAARITDPEELKELLGIPFTPEQVACITARPAPQVIVAGAGSGKTTVMAA
RVVWLVGTGQVAPDRVLGLTFTNKAAGELAERVRRALVTAGIVDQDPDPGATEEAAGEPV
ISTYHAFAGQLLKDHGLRVGLEPSARLLADATRFQLAARVLRSAPGPYPALTRPFSDLVT
DLLALDAELAEHLVPAERLRAYDTELLRTLEGARLTNEALRKVPEAARARQELLGLVEAY
REEKRRRDLLDFGDQIAHSATLALDHPEVGRILREQFAVVLLDEYQDTSVAQRLLLSGLF
GGGTGHPVTAVGDPCQAIYGWRGASVANLDDFPEHFRHADNSPARRFALSENRRSGGRLL
DLANGLAAPLRAMHEGVEALRPAPGAERDGAVRCALLPTHAEELAWLADSIAHLVRTGTP
PGEIAVLCRTAGDFAQIQGALVERDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANAA
LVRLLTGPRWRIGPRDLALLGRRARALVFHGGPDGADDDPDLRLPGAVEGTDPSEVISLA
DALDTFLEAGGGPDDGLPFSAEARIRFARLAAELRELRRSLADPLMDVLHRVLATTGLEV
ELSASPHALAARRRETLGNFLDVAAAFAGREGGAAVEGEATLQGFLGFLRTAAQYEKGLD
NALPGGENTVKVLTAHKSKGLEWDVVAVPGLVAKQFPSEQSRESWTANAKVLPHELRGDA
RTLPDVTAWDSKGIAAFKDAMKGHQRTEELRLGYVTFTRPRSLLLGSGHWWGPTQKRPRG
PSAFLDALREHCEAGYGEVEAWAEPPEEGAENPALRASAADRAWPLPLDPAALRHRRRAA
DVVLAHLARIETAGEGPTAQDGGHSSADGGPFPEPMDDLEPPEEPEPLEDPEWPAPPEDP
YEDADAYGAADDSYEPYEDEPYGDGPHADPYGAPEPGVPDITREPAEDELAPEEARLASS
WDRDLDALAGELRRARETVHEVPLPGTLTASQLLRLADDPDAFARELARPMPRPPRPAAR
RGTRFHAWVEARFEALSLPFLGPDELPGGEEDEAEIADERDLTALKEAFARTPYARRTPY
RVEVPVQLTLAGRIIRGRIDAVYRASGSGPDGGPRYEIVDWKTGRSQDADPLQLAIYRLA
WAEQHGLPLSAVTAAFVYVRSGEVVRPAGLPGRAGLERVLLGEPGGGTGGGPLGEPDEGD
GGAEADVAGDGAEGAAGNDHTDAEAVTESERS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgggcaccgatagcctcactggagtggcagcccgcatcaccgatcccgaggag
ctcaaggaactcctcgggatcccgttcacccctgagcaggtggcgtgcatcaccgcacgg
cccgccccgcaggtgatcgtcgccggggcgggctccggcaagaccacggtgatggccgcc
cgcgtcgtctggctggtcggcaccggacaggtcgcgcccgaccgggtgctcggcctcacc
ttcaccaacaaggccgccggagagctggccgagcgggtccgtagggccctcgtcacggcg
ggcatcgtggaccaggacccggatccgggcgccaccgaggaggccgcgggcgagcccgtc
atctccacgtaccacgccttcgccggacagttgctcaaggaccacgggctgcgcgtcggc
ctggagccgagcgcccggctgctcgccgacgccacccgcttccagctcgccgcgcgcgtc
ctgcgctcggcccccggcccgtatccggcgctcacccgccccttctccgacctggtcacc
gatctgctcgcgctcgacgccgagctcgccgagcacctcgtccccgccgagcggctgcgc
gcgtacgacaccgagctgctgcggaccctggagggggcgcggctcaccaacgaggcgctg
cgcaaggtgcccgaggccgcccgcgcccgccaggagctgctgggcctggtcgaggcgtac
cgcgaggagaagcggcgccgcgatctgctcgacttcggcgaccagatcgcccattcggcg
accctggccctcgaccacccggaggtcggtcggatcctgcgcgagcagttcgcggtcgtc
ctgctcgacgagtaccaggacacctcggtcgcccagcggctgctgctgtccggtctcttc
ggcggcggcaccggacaccccgtcaccgccgtcggcgacccctgccaggccatctacggc
tggcgcggcgcctccgtggccaacctggacgacttccccgagcacttccggcacgccgac
aacagcccggcgcggcggttcgcgctcagcgagaaccggcgcagcgggggccgcctcctg
gacctcgccaatgggctggccgccccgctgcgcgcgatgcacgagggcgtcgaggcactg
cgccccgcgcccggtgccgagcgggacggagcggtgcgctgtgcgctgttgcccacccac
gccgaggagctggcctggctcgccgactccatcgcccacctggtgcgcaccggcaccccg
cccggtgagatcgcggtcctgtgccgtacggcgggtgacttcgcgcagatccagggcgcc
ctggtggagcgggacattccggtggaggtggtgggcctgtcggggctgctgcatctgccg
gaggtcgccgatctggtggccgtctgcgaggtcctccaggacccgggggccaacgccgcg
ctggtccgtctgctcaccgggccgcgctggcggatcggcccccgcgacctcgcgctgctc
ggccgccgcgcccgcgcgctggtcttccacggcgggccggacggggcggacgacgatccg
gacctacggctccccggggccgtcgagggcaccgacccctccgaggtgatctccctcgcc
gacgccctcgacaccttcctggaggcgggcggcggcccggacgacgggctgcccttctcg
gccgaggcacggatccggttcgcccggctcgccgccgaactccgcgaactgcgccgctcg
ctggccgatccgctgatggacgtgctccaccgggtgctggccaccacgggcctcgaggtc
gagctgtccgcctcaccgcacgccctggccgcgcgccgccgcgagacgctcggcaacttc
ctggacgtcgcggccgccttcgcgggccgggagggcggcgcggccgtggagggcgaggcc
accctgcagggcttcctcggcttcctgcgcaccgccgcgcagtacgagaaggggctcgac
aacgccctccccggcggtgagaacacggtcaaggtgctcaccgcccacaagtccaagggg
ctggagtgggacgtggtggcggtgccggggctggtcgccaagcagttcccgagcgagcag
tcccgcgagtcctggacggcgaacgcgaaggtcctgccgcatgagctgcgcggggacgcg
cggaccctcccggacgtcaccgcctgggacagcaaggggatcgcggccttcaaggacgcc
atgaaggggcatcagcggaccgaggagctccggcttggctatgtgacgttcacccggccg
cggtcgctgctcctgggctccggccactggtggggccccacccagaagcggccgcgcggc
ccgtcggccttcctggacgcgctgcgcgagcactgtgaggccgggtacggcgaggtcgag
gcatgggccgagccgccggaggagggcgcggagaacccggccctgcgggcgtcggcggcc
gaccgggcctggccgcttccgctggacccggcagcgctgcgccaccggcggcgcgccgcc
gatgtggtgctcgcccatctggcgcgcatcgagacggcgggggaggggccgaccgcgcag
gacggggggcactcctcggctgacgggggtccgttcccggagcccatggacgatctggag
ccaccggaggagcctgaacccctggaggacccggagtggcccgcgcctccggaggaccct
tacgaggacgcggacgcgtacggagctgccgacgactcgtacgagccatacgaggacgag
ccgtacggcgacgggccacacgccgatccttacggcgcaccggaacccggtgtgccggat
atcacgcgagaaccggccgaggacgagctggcacccgaggaggcccggctggcgagttcc
tgggaccgcgatctggacgcgctcgccggggagctgcgccgcgcccgcgagaccgtgcac
gaggtgcccctgccggggacgctgaccgcctcccagctgctgcgcctcgccgacgacccg
gacgctttcgcacgggagctggcccgccccatgccccgcccgccgcgccccgccgcgcgg
cgcggcacccgcttccacgcctgggtcgaagcgcgcttcgaggcgctgtcgctgcccttc
ctcggccccgacgagctgcctggcggcgaggaggacgaggcggagatcgccgacgagcgg
gatctgaccgcgctcaaggaggcgttcgcgcgcacgccgtacgcccgtcgcaccccttac
cgcgtggaggtgccggtccagctgaccctggcgggccgcatcatccgcggccggatcgac
gcggtgtaccgcgcgtccggaagcggccccgacggcggcccgcgctacgagatcgtcgac
tggaagaccggccgctcccaggacgccgacccgctccagctggccatctaccgcctcgcc
tgggccgagcagcatggactgcccctgtcggcggtcacggcggcgttcgtgtacgtgcgc
agcggtgaggtcgtgcgccccgccggactgcccggccgggccgggctcgagcgcgtcctg
ctcggggagccgggcggcgggaccggcggcggtccgctcggcgagccggatgagggggat
gggggcgcggaggcggacgtggccggggacggggccgagggcgcggccggaaatgaccat
accgacgccgaagccgtcaccgagagcgagcgctcatga
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